Pairwise Alignments

Query, 466 a.a., Gamma-aminobutyrate permease from Pseudomonas fluorescens FW300-N2E2

Subject, 457 a.a., aromatic amino acid transporter (NCBI) from Escherichia coli BW25113

 Score =  294 bits (753), Expect = 4e-84
 Identities = 158/424 (37%), Positives = 241/424 (56%), Gaps = 17/424 (4%)

Query: 13  LAQGFKPRHVTMLSIAGIIGAGLFVGSGHAIAAAGPAVMLAYLFSGLLVVLVMRMLGEMA 72
           L +G K RH+ ++++ G IG GLF+GS   I +AGP ++L Y  +G +  L+MR LGEM 
Sbjct: 11  LKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSAGPGIILGYAIAGFIAFLIMRQLGEMV 70

Query: 73  VANPDTGSFSTYADQAIGRWAGFTIGWLYWWFWVLVIPIEALAAGHVLNQWFPAIDAWLF 132
           V  P  GSFS +A +  G +AGF  GW YW  +VLV   E  A G  +  W+P I  W+ 
Sbjct: 71  VEEPVAGSFSHFAYKYWGSFAGFASGWNYWVLYVLVAMAELTAVGKYIQFWYPEIPTWVS 130

Query: 133 ASVSIVLLAVTNLFSVSKYGEFEFWFAMAKVVAIIGFISLGFAVLMGWI-------PERE 185
           A+V  V++   NL +V  +GE EFWFA+ KV+A++  I  G     GW+       P+  
Sbjct: 131 AAVFFVVINAINLTNVKVFGEMEFWFAIIKVIAVVAMIIFG-----GWLLFSGNGGPQAT 185

Query: 186 ASGLSRLMEEHGGFAPNGLSAVVGAFITIMFSFIGTEAVTIAAAESDNPAQNIAKATRSV 245
            S L     + GGF P+G + +V     IMFSF G E V I AAE+DNP Q+I KAT  V
Sbjct: 186 VSNL----WDQGGFLPHGFTGLVMMMAIIMFSFGGLELVGITAAEADNPEQSIPKATNQV 241

Query: 246 IWRIGVFYLLSIFVVISVVPWNDPLLASVGSYQRALELMNIPHAKFLVDMVVLIAVASCM 305
           I+RI +FY+ S+ V++S++PW   + A    +      +        +++VVL A  S  
Sbjct: 242 IYRILIFYIGSLAVLLSLMPWT-RVTADTSPFVLIFHELGDTFVANALNIVVLTAALSVY 300

Query: 306 NSSIYIASRMLYSLGRRGDAPKALKVTSSAGVPRSAVIASTVLGAGVTLFSYFMPAGLFQ 365
           NS +Y  SRML+ L ++G+APKAL      GVP + ++ S ++ A   L +Y  P   F 
Sbjct: 301 NSCVYCNSRMLFGLAQQGNAPKALASVDKRGVPVNTILVSALVTALCVLINYLAPESAFG 360

Query: 366 FLLASSGAIALLVYLVIAISQLRMRRMLQRQNIELPFRMWLFPWLTWLVIVFISAALAVM 425
            L+A   +  ++ + +I+++ ++ RR  Q Q +   F   L+P   W+ ++F++A L +M
Sbjct: 361 LLMALVVSALVINWAMISLAHMKFRRAKQEQGVVTRFPALLYPLGNWICLLFMAAVLVIM 420

Query: 426 MVTP 429
           ++TP
Sbjct: 421 LMTP 424