Pairwise Alignments

Query, 449 a.a., Type I secretion outer membrane protein, TolC precursor from Pseudomonas fluorescens FW300-N2E2

Subject, 493 a.a., outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) from Escherichia coli BW25113

 Score =  142 bits (359), Expect = 2e-38
 Identities = 117/426 (27%), Positives = 203/426 (47%), Gaps = 39/426 (9%)

Query: 33  SLTAAYDASRLNDPTVQSAAHAFEASRHEEDIGRGGLYPQVSLTSRYGYGGRTDGGDDST 92
           +L   Y  +RL++P ++ +A   +A+  + +  R  L PQ+ L + Y Y   ++G  D+ 
Sbjct: 24  NLMQVYQQARLSNPELRKSAADRDAAFEKINEARSPLLPQLGLGADYTY---SNGYRDAN 80

Query: 93  YVNSNDYQANNVTLAAQQPLYDKARWAAYQEGKARGQLGTQVFDVAGQTLYDRVAKGYFD 152
            +NSN   A + +L   Q ++D ++W A    +    +    +    QTL    A  YF+
Sbjct: 81  GINSN---ATSASLQLTQSIFDMSKWRALTLQEKAAGIQDVTYQTDQQTLILNTATAYFN 137

Query: 153 VARAENEIKLIQQQKAAIQGLVVQSKKLYEGGQGAITDIDEAQARLDLVQAQEAEAQAR- 211
           V  A + +   Q QK AI   + Q+ + +  G  AITD+  A+A+ D V A E  A+   
Sbjct: 138 VLNAIDVLSYTQAQKEAIYRQLDQTTQRFNVGLVAITDVQNARAQYDTVLANEVTARNNL 197

Query: 212 --RVAALRALSGRASVPIDDILPMREELAAGSPIPPEQDLPY-WTAIAREASPE----LA 264
              V  LR ++G              ELAA +    + D P    A+ +EA       L 
Sbjct: 198 DNAVEQLRQITGN----------YYPELAALNVENFKTDKPQPVNALLKEAEKRNLSLLQ 247

Query: 265 ARLAAVKVAEAQADSQRAGHYPTLSLT-------TQLTRRETR-----QYQELDPRQDTY 312
           ARL+   +A  Q    + GH PTL LT       T  +  +TR     QY + +  Q+  
Sbjct: 248 ARLSQ-DLAREQIRQAQDGHLPTLDLTASTGISDTSYSGSKTRGAAGTQYDDSNMGQNK- 305

Query: 313 YVGVQLDIPLYRGGAVRASVAKAEAQLAGAQSDYDVQRQQLAEDIEADYLGVVAGFAKSK 372
            VG+   +P+Y+GG V + V +A+    GA    +   + + + + + +  + A  +   
Sbjct: 306 -VGLSFSLPIYQGGMVNSQVKQAQYNFVGASEQLESAHRSVVQTVRSSFNNINASISSIN 364

Query: 373 AMQRAVESNQRALTSTEKGFQGGVRSTVDILDAQQRLFQARRDLLNTKLDMLQSYVSLHT 432
           A ++AV S Q +L + E G+  G R+ VD+LDA   L+ A+++L N + + L + +++ +
Sbjct: 365 AYKQAVVSAQSSLDAMEAGYSVGTRTIVDVLDATTTLYNAKQELANARYNYLINQLNIKS 424

Query: 433 HTGQMN 438
             G +N
Sbjct: 425 ALGTLN 430