Pairwise Alignments

Query, 291 a.a., amino acid ABC transporter, periplasmic substrate-binding protein from Pseudomonas fluorescens FW300-N2E2

Subject, 265 a.a., Diaminopimelate-binding protein / L-cystine-binding protein from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score = 50.4 bits (119), Expect = 4e-11
 Identities = 63/277 (22%), Positives = 111/277 (40%), Gaps = 43/277 (15%)

Query: 11  LLLCGQAAQAQV-RSYDQIIAAGELKVAVYKDFAPYSFEDQ-GQPRGVDVELAQALAKAM 68
           +L  G A QA       +I  +G L V +   + P+SF D+ G+  G +VE ++ALAK +
Sbjct: 18  MLSAGIAGQAMAGEQLQKIKDSGTLNVGLEGTYPPFSFVDESGKLTGFEVEFSEALAKEL 77

Query: 69  GVRLTLM---WAPPGEKLDDDLRDYIWRSSPLHDRQLADLMMRVPYDHDYVQKRNDIGEL 125
           GV+  +    W      LD    D +     + D +               +K+ D  E 
Sbjct: 78  GVKAKIQPSKWDGILAALDSKRLDVVINQVTISDER---------------KKKYDFSE- 121

Query: 126 ENAQVVMFGPYQQECWQVAYDRRRLDSVGSVAVFQQHPIGVEVDSVPSFYLISVFNGMLS 185
                    PY     Q    ++  D++ SV       +GV + +    +L +    +  
Sbjct: 122 ---------PYTISGIQALVLKKNADTIKSVKDLSGKKVGVGLGTNYEEWLKA---NVPD 169

Query: 186 AKTRHYPGVSQAFKAMQAGEVDAVMAMRGEVDWQVHEAADPQLALAENAYPSMGK--QRW 243
           A  + Y       + +  G +DA++  R         AA    A  +N     G+   R 
Sbjct: 170 AIVKTYDDDPSKIQDLSVGRIDAILVDR--------LAALEMAAKTKNKLVPAGEAFSRQ 221

Query: 244 EIGMAVHESNRQLAYAVEEALEGLIRDGSVKTLYAHY 280
             G+A+ +   +L  A+++A++ L  DG++K L   Y
Sbjct: 222 ASGIALRKGEPELLAAIDKAIDKLRADGTLKKLSEKY 258