Pairwise Alignments

Query, 395 a.a., hypothetical protein from Pseudomonas fluorescens FW300-N2E2

Subject, 384 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  429 bits (1102), Expect = e-125
 Identities = 212/375 (56%), Positives = 269/375 (71%), Gaps = 1/375 (0%)

Query: 22  RMLAIDALRGFVMLLMLVDHVRETFLLHRQVTDPIDALSVTPDLYFTRLLSTLCAPVFIF 81
           R+L+IDALRG V+L ML+DHVRETFLLHRQV+DP+   S  P L+ +R L+ LCAPVF+ 
Sbjct: 10  RLLSIDALRGLVILFMLLDHVRETFLLHRQVSDPMTIDSTEPALFVSRTLAHLCAPVFVL 69

Query: 82  LTGLSAWLYSQKHTAGQ-TSLFLLKRGLFLVFLELTFVCFAWNAEFPPKTLWLQVIWCIG 140
           LTGLSAWLY QK+   +  S FL KRGLFLV LE T V FAW  + PP  +++QVIW IG
Sbjct: 70  LTGLSAWLYGQKYQGRRDVSAFLFKRGLFLVVLEFTLVNFAWTFQLPPSVIYMQVIWAIG 129

Query: 141 ICMIVLAALLHLKRRWLILLGVAIVAGHNLLDGVVPGPDSPFFVPWSILHQRAFIDITEF 200
           + MI LAAL+ L R  LI   V I+AGHNLLDG+     S   VPW+ILH+R++I++ + 
Sbjct: 130 VSMIALAALVWLPRPLLIAFAVVIIAGHNLLDGLHFETGSALHVPWAILHERSWIEVGDS 189

Query: 201 TRARTTYPVLPWIGVILLGWAIGPWFGKDVEPAVRLRRLFKMGLGLLLAFVLIRYLNVYG 260
            R R TYPVLPWIGVI LG+ +GPWF K ++P +R R L   G+   + FV++R  N YG
Sbjct: 190 LRLRITYPVLPWIGVIALGYCLGPWFAKSMQPTLRQRYLLLGGVSAWVGFVVVRAANGYG 249

Query: 261 DKPWLQTGDALRTFMSFMSATKYPPSLMFLMPTLGIGLMLLALFEKAQDRGAIALLAIYG 320
           D PW    + ++T MSF + TKYPPSL+FL  TLGIGL+LL  FE+A  +  I++LA +G
Sbjct: 250 DTPWQAYDNGVQTLMSFFNITKYPPSLLFLALTLGIGLLLLLAFEQAGAKRWISMLATFG 309

Query: 321 GAPMFFYLLHLYVLKALYLTAVAIWGTNQGTYFGFDDLPMVWLWSVLLGVVLFFPTRWFA 380
            APMFFYLLHLYVLK LY+  VA++G N G YFGFD +  +WL ++LL + L+ P  WFA
Sbjct: 310 AAPMFFYLLHLYVLKILYVVCVALFGLNHGNYFGFDGMGAIWLVALLLPLALYPPVHWFA 369

Query: 381 GLKQRRRDIAILKYL 395
           GLK RRRD+A LKYL
Sbjct: 370 GLKARRRDLAWLKYL 384