Pairwise Alignments

Query, 226 a.a., AraC family transcription regulator from Pseudomonas fluorescens FW300-N2E2

Subject, 265 a.a., DLP12 prophage; predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

 Score =  124 bits (312), Expect = 1e-33
 Identities = 75/223 (33%), Positives = 111/223 (49%), Gaps = 4/223 (1%)

Query: 1   LQWDDREMRAGPQHLILMPAGRELGISNFPGPHGHYIADAVTFPLSTLRNFSSRYSQQIM 60
           + W+   +      +IL P G E  I N+P   G Y+A+ +  P+  + +F   Y+    
Sbjct: 42  INWETHTLTVDNNQIILFPCGYEFYIENYPEA-GLYLAEMLYLPIDLIESFQKLYTVTDQ 100

Query: 61  SRRGALKTDLCVPLDRHTTQAWNQLLASINANAPDALRTLYGEAVLLSLCLGGQIGPLLM 120
            R    KT   +P +      W QL  S++      ++      VLLSL +      LL 
Sbjct: 101 IRN---KTSFFLPQNPELIYCWEQLKTSVSRGFSTKIQEHLAMGVLLSLGVNHVNHLLLS 157

Query: 121 GRNDPICERVQQMVMGSPERDWTVASVAQQLNLGESTLRRQLANEGDSFRSILEGVRLAT 180
                +  R   +++  P   WT   VA+ L +  STL R+LA+EG SF+SIL+ VRL  
Sbjct: 158 YSKQSLISRCYNLLLSEPGTKWTANKVARYLYISVSTLHRRLASEGVSFQSILDDVRLNN 217

Query: 181 ALQWLQTTSRPIGEIAGACGYASASRFAVRFRSRYGLSPRELR 223
           AL  +QTT +PI EIA   GY   SRF  RF +R+ ++PRE+R
Sbjct: 218 ALSAIQTTVKPISEIARENGYKCPSRFTERFHNRFNITPREIR 260