Pairwise Alignments

Query, 210 a.a., DNA-binding response regulator, LuxR family from Pseudomonas fluorescens FW300-N2E2

Subject, 219 a.a., Transcriptional regulatory protein DegU from Pseudomonas sp. DMC3

 Score =  145 bits (367), Expect = 4e-40
 Identities = 81/210 (38%), Positives = 130/210 (61%), Gaps = 11/210 (5%)

Query: 11  LVDDHSLVRDGIKALLSVMPRLDVVGEAENGAQAIEMVGRSQPDLLLMDISLKDMNGLEL 70
           LVDDHSL+R G++AL+  +P   V+GEA +G+Q +EMV +  PD++L+DIS+++  GLE 
Sbjct: 7   LVDDHSLIRAGVRALVLDIPGYAVIGEASDGSQLLEMVEQLSPDIVLLDISMRETGGLEA 66

Query: 71  TRLLGKQYPSLKILILSMYDNYEYVSESVRSGASGYVLKNAPSREIVAAIEAIISGGTFY 130
            + L +  P  K+LILSM+ +   + +++ SGA GY+LK+  + E+  A+EA+ +   + 
Sbjct: 67  LQRLKRVRPQSKVLILSMHTDPALIMQALESGAHGYLLKDTTATELEHALEALRNNERYL 126

Query: 131 SAEIAQRLATDPHTDNE-----------LTPRESQVLSKMVQGLNNKEMARELDISVRTV 179
           S  IA  +     T N+           LT R+ ++L  +V+G + +E+A  L +SV+TV
Sbjct: 127 SPAIAHTVINQALTRNQKSQPDVADSHNLTARQLEILRLIVRGKSTREIANGLGLSVKTV 186

Query: 180 ETHRLSIRRKLNIDKPAALVKYAIDHGIIS 209
           ETHR  I ++L I   A LV +A+   IIS
Sbjct: 187 ETHRAQIMKRLQIYDVAGLVLFAVREQIIS 216