Pairwise Alignments

Query, 556 a.a., DNA damage response nuclease (from data) from Pseudomonas fluorescens FW300-N2E2

Subject, 550 a.a., Hypothetical protein, restriction endonuclease-like VRR-NUC domain from Pseudomonas fluorescens GW456-L13

 Score =  843 bits (2179), Expect = 0.0
 Identities = 404/547 (73%), Positives = 452/547 (82%)

Query: 1   VAVRSLDDPFYYLNNFQQVLAWLTQRYADVLSTDEQRFIEHFAALPRGAQGLLVRMVMRK 60
           V    LDDPFYYLNNF QVL WL QR +D+LS +EQRF   F  LPR +Q LLVRMVMRK
Sbjct: 1   VTANPLDDPFYYLNNFMQVLDWLEQRSSDLLSVEEQRFTHEFKRLPRESQALLVRMVMRK 60

Query: 61  GLRFRHSKLHYPEIGDISAAVAPLLALGWVEEQAPIGLVELFEVLLKPEILLCLGHLIEH 120
           G+ FR SKLHY EIGDI  A  PLL LGWVE Q PI + ELFEVLLK EIL     +I+ 
Sbjct: 61  GVHFRASKLHYDEIGDIGTAAGPLLELGWVEGQMPIAIDELFEVLLKAEILQTFAAVIDQ 120

Query: 121 PKAKKTEWLHALDEHLNQPQPFDAWCPQLDDRLYSLTIMSLCDRLRLMFFGNLYQDWSEF 180
           PK KK +WL AL E   Q Q F+ WCP LD+RL+SLTIM LCDRLRLMFFGNLYQDWSEF
Sbjct: 121 PKGKKADWLPALCEQFPQVQSFNDWCPSLDERLFSLTIMQLCDRLRLMFFGNLYQDWSEF 180

Query: 181 VLADLGIFTYETVEFSAESRGLRSREDVDACLFLHDCQQRFEAGEPPEEIVAQVNELSLD 240
           VLADLGI+TYE VEF AESRGLRSREDVDAC+ LH  QQ+FEAGE  EE+  ++  L+LD
Sbjct: 181 VLADLGIYTYEKVEFCAESRGLRSREDVDACVLLHAYQQQFEAGEALEEVAERIKGLALD 240

Query: 241 NPWLERRRGKLLFQIGQHGERIGDFALALGIYRDCTYPGARLRMVRVLERIGEYGLALEL 300
           NPWL+RRRGKLLFQ+ Q+ ERI DF++AL +YR+C +PGAR R++RVLER G++  A++L
Sbjct: 241 NPWLQRRRGKLLFQMAQYCERIADFSMALNLYRECAFPGARARLIRVLERSGQFEQAMDL 300

Query: 301 GEVAMQAPQSAAETQALLRIVPRLRRKLGGPPVPRGLAREVERLELQLPRVDPTLSVEYH 360
              A QAPQSAAE Q LLR++PRL RKLGGPP+ R   RE++RL+LQLPR DP LSVE++
Sbjct: 301 AVQAEQAPQSAAEHQQLLRVLPRLLRKLGGPPIKRAAPREMQRLDLQLPRTDPALSVEFY 360

Query: 361 VQAHLHDDTAPVHYVENSLINSLFGLLCWPAIFAPLPGAFFHPFQRGPADLLNEDFHARR 420
           VQAHL  D+APVHYVENSL+NSLFGLLCWPAIFAPLPGAFFHP QRGP DLL+EDFH RR
Sbjct: 361 VQAHLAQDSAPVHYVENSLVNSLFGLLCWPAIFAPLPGAFFHPLQRGPVDLLSEDFHVRR 420

Query: 421 AELFAACLVELDDGRYRQTISRRYAEKWGVQSPFVFWGALSEPLLEQALDCLPAAHLKHW 480
           AELF ACL ELDDGRYRQTI  RYA KWGVQSPFV+W  LSE LLEQALDCLPA HLK+W
Sbjct: 421 AELFQACLAELDDGRYRQTIRERYAAKWGVQSPFVYWSVLSEELLEQALDCLPAEHLKYW 480

Query: 481 FDRLLLDIKANRAGMPDLIQFWPQHKTYRMIEVKGPGDRLQDNQLRWLEFCHEHQMPVAV 540
           F+RLLLDIKANRAGMPDLIQFWPQ KTYRMIEVKGPGDRLQDNQLRWLEFCHEHQMP+AV
Sbjct: 481 FNRLLLDIKANRAGMPDLIQFWPQQKTYRMIEVKGPGDRLQDNQLRWLEFCHEHQMPIAV 540

Query: 541 CYVQWAE 547
           CYVQWAE
Sbjct: 541 CYVQWAE 547