Pairwise Alignments

Query, 187 a.a., Transcriptional regulator, TetR family from Pseudomonas fluorescens FW300-N2E2

Subject, 191 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

 Score = 65.9 bits (159), Expect = 4e-16
 Identities = 43/177 (24%), Positives = 83/177 (46%), Gaps = 1/177 (0%)

Query: 10  RDIILDVAEKLIYKSGIAATGMDLLVKTAGVSRKSVYRYFANKDDLIVAALRRRDERWMH 69
           R+ +L  A KL+   GIA T ++++ +        + R++ +K+ ++  ALR   ++   
Sbjct: 3   REDVLGEALKLLELQGIANTTLEMVAERVDYPLDELRRFWPDKEAILYDALRYLSQQIDV 62

Query: 70  WFSS-EVDKAPTPTARLLSLFTVLKGWFDSEGFRGCAFINTSGETGDPQDPVRQVAKMHK 128
           W     +D+  T   +LL+ +  L     +  + GC FI       DP  P+ Q+A   K
Sbjct: 63  WRRQLMLDETQTAEQKLLARYQALSECVKNNRYPGCLFIAACTFYPDPGHPIHQLADQQK 122

Query: 129 QKLLDYVTRLCVEQGVQNPDALARQLLILIDGAITVALVMGDHSAADDAQDLLKKLL 185
               D+   L     V +P  +A+Q+ ++++G ++  LV    +  D A  L + +L
Sbjct: 123 SAAYDFTHELLTTLEVDDPAMVAKQMELVLEGCLSRMLVNRSQADVDTAHRLAEDIL 179