Pairwise Alignments

Query, 508 a.a., cell wall degradation protein from Pseudomonas fluorescens FW300-N2E2

Subject, 560 a.a., L,D-transpeptidase family protein from Rhodanobacter sp000427505 FW510-R12

 Score =  322 bits (825), Expect = 2e-92
 Identities = 189/497 (38%), Positives = 264/497 (53%), Gaps = 28/497 (5%)

Query: 26  AVACPDVAVGVDFPTQLDLQAFYQQNAGQEVWSDDERRGALQVQLQQLADDGLDPARYGL 85
           AV  P  AV V          FY+QN     W+  +    L   L+ +A DGLDP  Y L
Sbjct: 62  AVGTPGGAVAV----------FYEQNRFAPAWTRPDDLDQLLAALRDVATDGLDPQDYAL 111

Query: 86  PV-----------EGATQGPHCADIAISRRYLQALHDLRFGYLPQDRLEPVWKANPPPQD 134
                            Q     D+  +   L AL  L  G +    L+  W  +P   D
Sbjct: 112 DELQRGRAVLVDPRATPQQRAQFDLLATDACLGALLHLYRGKVDPATLDTHWNFDPRQLD 171

Query: 135 HPAVVLAIA-GLGLRNLADAFEQARPNLDLYRNLRGLYARLRQQPL-AEWQAVPGGPLLQ 192
               + A+   L    + + F +ARP   LY  LR   A+LR+      W A+  G  L+
Sbjct: 172 QARGLKAVRDALAQGTVGELFARARPQHPLYGQLRTALAKLREVAAQGGWPAIADGATLK 231

Query: 193 PDKQDARVPALAQRLFNEGYLSTPPQLSDEHYSPMLVEAMKSFQAQHSLQADGVVGPWTV 252
           P   DARVPAL QRL   GY        D+ Y P L  A+K FQ +  L  DG +G  T+
Sbjct: 232 PGTHDARVPALRQRLQLVGYAVGAGV--DDLYDPTLEAALKQFQREQYLTPDGHLGKATL 289

Query: 253 TELNISPAMRREQLRINLERMRWLAQDVEADSVLVNVAAAQLTVYQGGAPVWQTRTQVGR 312
             LN+  A R +QLR+NLER RWL   ++ D V+V++A  Q+  Y+ G PVW++R QVG+
Sbjct: 290 AALNVPVAARIDQLRVNLERARWLLYQLQGDFVVVDIAGYQVAYYKDGKPVWRSRVQVGK 349

Query: 313 AQRQTPLLKSHVTRLTLNPTWTIPPTIMREDKLPEIRRDPEFLSRHNLRILDGDGLPLLA 372
             R TP+ KS +T LTLNPTWT+PPTI++ D LP++R++  +L+ + +R+LD  G  L  
Sbjct: 350 PYRSTPVFKSKITYLTLNPTWTVPPTILKNDILPKVRKNRGYLAANRIRVLDNQGRELSP 409

Query: 373 EDIDWEHPGNLMLRQDPGPKNPLGKMAIRFPNPFSVYLHDTPSQALFSKGPRAFSSGCVR 432
             +DW +P  ++LRQD GP N LG++ IRFPN ++VY+HDTP Q LF+   R FSSGC+R
Sbjct: 410 SSVDWANPRGIVLRQDAGPGNSLGRLVIRFPNDYAVYMHDTPHQELFANERRTFSSGCIR 469

Query: 433 IEQVMRLRDLLVSPA---ERARTETLLASESTHEFRLARPVPILLGYWTAQADSQGQAVY 489
           +E+   L +LL+      +RA  +  + +  T    L +PV +LL YWT      G+  +
Sbjct: 470 VERPRELAELLLDDQQRWDRASIDGAIDTLKTQTVMLRKPVTLLLAYWTVDLREDGRVGF 529

Query: 490 VPDIYGRDATLSAARGR 506
            PD+Y RD  L AA  R
Sbjct: 530 RPDVYDRDPPLLAALER 546