Pairwise Alignments

Query, 278 a.a., L-rhamnose operon transcriptional activator RhaR from Pseudomonas fluorescens FW300-N2E2

Subject, 269 a.a., AraC family transcriptional regulator from Pseudomonas fluorescens SBW25

 Score =  164 bits (414), Expect = 2e-45
 Identities = 99/261 (37%), Positives = 144/261 (55%), Gaps = 17/261 (6%)

Query: 15  SGIETVRAHFEGHAYDPHWHDTYLVGVTEQGVQQFHCRRQQHNSTPGKVFLLEPGELHDG 74
           SG++ + A+F G A+DPH HDTY +G T  GVQ FH R    +S PG   +L P E HDG
Sbjct: 18  SGLDRIEAYFAGFAFDPHRHDTYAIGRTLTGVQSFHYRGDMIHSLPGMTMVLHPDETHDG 77

Query: 75  NAPHDHGFTYRTLYLEPQWLERELRSLFDVAPDNAQLGFAAT-LTDDARLASATAMAFQS 133
           +A  D GF YR +Y+EP  +++ L            L F  + L+ D RL  A+ +  Q+
Sbjct: 78  HAGSDEGFKYRMIYVEPSLIQQIL--------GGKPLPFIPSGLSTDPRLFRASEVLLQN 129

Query: 134 LHEQEIRIVRQTALDTL---LANLTQHLHWRARINPDPRLPLVAQQARDYLHSHLSEDIG 190
           L      +  Q AL  L   L+N++  +  R   +      + A++AR+++HS L   I 
Sbjct: 130 LDNPLDPLQEQDALFDLAHALSNVSGGIVSRKAFD-----YVAAERAREFIHSALGRSIT 184

Query: 191 LDDLAQVAGVDRFRLTRAFKAAFGLAPHAYLIQLRLARARRLLARGESAVAVAAMLGFAD 250
           LD++A  AG DR+ L+R F+  FG +P+ YL   RL   R LLA+G+S V  A   GF D
Sbjct: 185 LDEMADHAGRDRWALSRDFRLLFGTSPYRYLTMRRLDLVRSLLAQGQSLVDAALTAGFTD 244

Query: 251 QSHLGRWFQRAYRLSPADYRK 271
           QSH+ R F+  Y + P+ + K
Sbjct: 245 QSHMTRQFRSTYGMPPSRWVK 265