Pairwise Alignments

Query, 791 a.a., autotransporter from Pseudomonas fluorescens FW300-N2E2

Subject, 763 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 81.3 bits (199), Expect = 2e-19
 Identities = 165/723 (22%), Positives = 289/723 (39%), Gaps = 124/723 (17%)

Query: 102 GTIVDAFEDGDVAQMTGGTIGRVDMKLDDNVFDMSGGQIIGNLVTGFGQDTISLSAGR-I 160
           GT + +      +++TG T G        NV   S  ++  + VTG  Q  + L  G  I
Sbjct: 132 GTTIGSHAQVSRSEITGATYGA-------NVTSHSLLELNDSKVTGSSQQGLRLLGGAAI 184

Query: 161 GGNVSVSGGNDSITVS--GGEILGEVRASAGDDQLQWSGGLIHSAILMGDGSDTALLSNL 218
             N  ++G    + ++      +     +    +++  GG   S +       + +++ +
Sbjct: 185 ARNSEITGATTGVVMARESSTAIESPHLTLDGSRVEGLGGPAISVL-------SPIMAEI 237

Query: 219 DETGLSITPSVNGGLGQDVLTFEGSTSSTGARYLNWETVNLTQGSQLDLNDTLTL--GDS 276
           D T  S     NG + +  L+  GS +           + + + S LDLN  +    GD 
Sbjct: 238 DVTNGSSLSGKNGNMLE--LSGGGSANMRVNNSALDGNIQVGKDSALDLNLDVAFMNGDI 295

Query: 277 ATGTGTLNI--ESGSTLTATQGVVAPFTAGQLATLNNAGTIDLTQGNTRTIDTLTVQGNY 334
               G+ N+   +GS LT     V   +      +N+  T  +  G  + ++ L++ G  
Sbjct: 296 VNSGGSANVGLNNGSVLTGRLDNVDKLS------VNSDATWVMVDGQ-QALNALSMNGGN 348

Query: 335 V--GDNGQLHVQTAIGADGSASDKLV-VNGGTLTGNTA-ITVTNLG-------GTGALTT 383
           V  G++G  +        G+    ++  + G+LTG+   +T T+ G        TGA   
Sbjct: 349 VKFGESGAFYKLDVANLSGTGGTFIMKADFGSLTGDFLNVTGTSAGHHQLLLAATGADPL 408

Query: 384 QDGIEVVQAQGGAVSNIDAFSLAQS-VSAGAFDYRLFKGGVTGNQNN-WYLRSTVVAGPV 441
            + + +V    G  +    FSL    V  G + Y L       NQN+ WYL         
Sbjct: 409 NERLHMVHTADGVAN----FSLVGGRVDRGTYSYDL----TADNQNHDWYLD-------- 452

Query: 442 AAPIPTAPPAPGAPPVPTLPPLPTAVPGAAPIPLYRPEVPTWSVLPPAAAQLTLMALGTF 501
                        P    + P   +V     + L+            AA  + L  +   
Sbjct: 453 -------------PDSKVISPSTNSV-----LALFN-----------AAPSVLLGEMTNL 483

Query: 502 HDRQGDQRLLTETGAFGAG-WGRVYG----VDLDKTWAGTVTPQFDGSIKGFQVGNDLYS 556
             R G+ R     G   AG W R YG    V  DKT  G     ++ S +GF +G D  +
Sbjct: 484 RTRMGELRF---NGGQTAGLWTRAYGNKYEVSNDKTGLG-----YNQSQRGFTLGAD--A 533

Query: 557 SLLSGGQTQRIGFFVGHTELNGNVKGFNLGFEGRHAGKIELDGDSYGLYWTLTDPNGG-Y 615
            L +G     IG   GH++ + ++   NLG       K  ++    G Y T  D   G Y
Sbjct: 534 PLEAGDGQWLIGAMAGHSQSDLDL---NLG------SKATINSYYVGGYATWLDSESGFY 584

Query: 616 VDTVVMGTRLNGDNRSERGLKIDNRGH----ALTASAETGYPFKVTADWDFEPQAQI--I 669
            D V+   RL+ ++         ++G+    A+ ASAE G    +   +  EP  Q+  +
Sbjct: 585 FDGVLKFNRLHNESNVAMSDGKKSKGNYTQNAMGASAEFGRHITLDDGYFVEPYGQLAAV 644

Query: 670 YQKVSLDTQNDGVSKVEFDSDGAWTGRLGARLKGRYQV-SGMPVEPYLRANLWHTFSGTD 728
             +    T ++G+ + + D   +  G LG       Q+ SG  ++PYL+A + H F  ++
Sbjct: 645 ITQAQSYTLDNGL-EAKGDRSSSVIGELGVTAGNNIQLDSGGVLQPYLKAAVAHEFDQSN 703

Query: 729 SVIFDDTERVETQQRASTGDLGIGVTVSLAPSVAMYAGANYSQNLDSNQQHSVMGNVGLR 788
            V  +D          S   LG GV +S++ +++M+  A+  +++  N +  +  NVGLR
Sbjct: 704 KVFVNDNS-FNNDLSGSRLKLGAGVAMSVSQNLSMH--ADLERSVGKNIKQPLGVNVGLR 760

Query: 789 ISW 791
            ++
Sbjct: 761 YAF 763