Pairwise Alignments

Query, 330 a.a., ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components from Pseudomonas fluorescens FW300-N2E2

Subject, 319 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

 Score =  128 bits (322), Expect = 2e-34
 Identities = 78/253 (30%), Positives = 135/253 (53%), Gaps = 7/253 (2%)

Query: 67  KVEYSEFAGGNLIVEALASGSLDVGGMSEIPPIFSIQSHRQPRLIAVLQSDVNNQVFLIP 126
           K+ + EF  G  ++EAL  GS+D+G   +IPPIF+  +      + V       +V L+ 
Sbjct: 57  KISWVEFPAGPQMLEALNVGSIDLGSTGDIPPIFAQAAGADLVYVGVEPPKPKAEVILVA 116

Query: 127 KDSPIESIGQLRGKRVGYVRSTTSHYFLIKALKEQGLTMNDITAVALTPQDGFSAFQSGQ 186
           ++SPI+++  L+G +V + + ++SH  L++AL++ GL   DI    LTP D  +AFQ G 
Sbjct: 117 ENSPIKTVADLKGHKVAFQKGSSSHNLLLRALRQAGLKFTDIQPTYLTPADARAAFQQGN 176

Query: 187 LDAWVIYGVFIQLAKFRSGARVLKTALGY-LSGNYLIAARPAALEDPLRKQAI-QDYIQR 244
           +DAW I+  +   A  + G RVLK       +G++ +AARP A ++    Q +   + + 
Sbjct: 177 VDAWAIWDPYYSAALLQGGVRVLKDGTDLNQTGSFYLAARPYAEKNGAFIQGVLATFSEA 236

Query: 245 QARTWEWINNNPEPWATKSAQLLGVDKAVFLDMYNNRSQPTKVVEVNDQAIASQQEVADL 304
            A T     +  E      A+ +G+   V     ++R  PT +  VN +  A QQ+ ADL
Sbjct: 237 DALT----RSQREQSIALLAKTMGLPAPVIASYLDHR-PPTTIKPVNAEVAALQQQTADL 291

Query: 305 FFAAGVLNERLDV 317
           F+   ++ +++D+
Sbjct: 292 FYENRLVPKKVDI 304