Pairwise Alignments

Query, 307 a.a., Inositol transport system sugar-binding protein from Pseudomonas fluorescens FW300-N2E2

Subject, 318 a.a., predicted sugar transporter subunit: periplasmic-binding component of ABC superfamily (NCBI) from Escherichia coli BW25113

 Score =  113 bits (282), Expect = 7e-30
 Identities = 79/252 (31%), Positives = 134/252 (53%), Gaps = 7/252 (2%)

Query: 1   MKKRLLTYLFV-ALFAPLALA-DIRIGVSIAQVDDVFLAQMRDYMAAHAKDLPGVNLQFE 58
           M KRLL    V A  + +ALA  + +G S    +  + A   +   + A+   G+ L+  
Sbjct: 1   MWKRLLIVSAVSAAMSSMALAAPLTVGFSQVGSESGWRAAETNVAKSEAEKR-GITLKIA 59

Query: 59  DAQGDVVRQLNQVQNFTAQGMDAIIVNPVDTAATQKMTAHAQKASVPLVYVNRRPDQAEL 118
           D Q     Q+  V++F AQG+DAI + PV     + +   A+ A +P+  ++R  D  + 
Sbjct: 60  DGQQKQENQIKAVRSFVAQGVDAIFIAPVVATGWEPVLKEAKDAEIPVFLLDRSIDVKDK 119

Query: 119 PPGVGYVGSDEIKAGEMQMRYLAEKMGGKG-NLAIMLGLLSNNATHNRTQGVKEVLKSYP 177
              +  V +D I  G++   +L +++ GK  N+  + G +  +   +R +G  E +K+ P
Sbjct: 120 SLYMTTVTADNILEGKLIGDWLVKEVNGKPCNVVELQGTVGASVAIDRKKGFAEAIKNAP 179

Query: 178 DIHVVEEQSAEWQRSKAMDLMNNWIL---SGKKIDAVAANADEMAIGAAMAINQAGMRSG 234
           +I ++  QS ++ RSK  ++M ++I    +GK I  V A+ D+M IGA  AI +AG++ G
Sbjct: 180 NIKIIRSQSGDFTRSKGKEVMESFIKAENNGKNICMVYAHNDDMVIGAIQAIKEAGLKPG 239

Query: 235 KDILVGGSDGGP 246
           KDIL G  DG P
Sbjct: 240 KDILTGSIDGVP 251