Pairwise Alignments

Query, 177 a.a., Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) from Pseudomonas fluorescens FW300-N2E2

Subject, 318 a.a., predicted sugar transporter subunit: periplasmic-binding component of ABC superfamily (NCBI) from Escherichia coli BW25113

 Score = 72.4 bits (176), Expect = 7e-18
 Identities = 48/162 (29%), Positives = 86/162 (53%), Gaps = 6/162 (3%)

Query: 1   MGDWVVKNLP-TGANVVLITGQIGSTTAMDRAKGVHQSLTAAGSKFKLVAEQSGEADRAK 59
           +GDW+VK +     NVV + G +G++ A+DR KG  +++  A    K++  QSG+  R+K
Sbjct: 137 IGDWLVKEVNGKPCNVVELQGTVGASVAIDRKKGFAEAIKNA-PNIKIIRSQSGDFTRSK 195

Query: 60  AMSVVENILTA-SAGNPPDVIICSTGDMTLGAVEAVRGMGLSDKIKII--GYDAYPEVLK 116
              V+E+ + A + G    ++     DM +GA++A++  GL     I+    D  P++ K
Sbjct: 196 GKEVMESFIKAENNGKNICMVYAHNDDMVIGAIQAIKEAGLKPGKDILTGSIDGVPDIYK 255

Query: 117 SIKAGEITGIVEQSPSKQIRTALRLAVENIRNGTKIESVTIT 158
           ++  GE    VE +P+     A     +  ++GT  E +T+T
Sbjct: 256 AMMDGEANASVELTPN-MAGPAFDALEKYKKDGTMPEKLTLT 296