Pairwise Alignments

Query, 177 a.a., Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) from Pseudomonas fluorescens FW300-N2E2

Subject, 311 a.a., D-allose transporter subunit (NCBI) from Escherichia coli BW25113

 Score = 79.7 bits (195), Expect = 4e-20
 Identities = 47/143 (32%), Positives = 77/143 (53%), Gaps = 7/143 (4%)

Query: 12  GANVVLITGQIGSTTAMDRAKGVHQSLTAAGSKFKLVAEQSGEADRAKAMSVVENILTAS 71
           G  V +I G+ G+ +   R  G  ++   A S+ KLVA Q  + DR KA+ V  N+L  +
Sbjct: 156 GGEVAIIEGKAGNASGEARRNGATEAFKKA-SQIKLVASQPADWDRIKALDVATNVLQRN 214

Query: 72  AGNPPDV--IICSTGDMTLGAVEAVRGMGLSDKIKIIGYDAYPEVLKSIKAGEITGIVEQ 129
               P++  I C+   M +G  +AV   G + K+ ++G D  PE  K ++AG++T  V Q
Sbjct: 215 ----PNIKAIYCANDTMAMGVAQAVANAGKTGKVLVVGTDGIPEARKMVEAGQMTATVAQ 270

Query: 130 SPSKQIRTALRLAVENIRNGTKI 152
           +P+    T L+L V+  ++G  I
Sbjct: 271 NPADIGATGLKLMVDAEKSGKVI 293