Pairwise Alignments

Query, 177 a.a., Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) from Pseudomonas fluorescens FW300-N2E2

Subject, 296 a.a., D-ribose transporter subunit (NCBI) from Escherichia coli BW25113

 Score = 79.7 bits (195), Expect = 4e-20
 Identities = 48/159 (30%), Positives = 88/159 (55%), Gaps = 18/159 (11%)

Query: 2   GDWVVKNLPTGANVVLITGQIGSTTAMDRAKGVHQSLTAAGSKFKLVAEQSGEADRAKAM 61
           GD++ K    GA V+ + G  G++ A +R +G  Q++ A   KF ++A Q  + DR K +
Sbjct: 138 GDYIAKKAGEGAKVIELQGIAGTSAARERGEGFQQAVAA--HKFNVLASQPADFDRIKGL 195

Query: 62  SVVENILTASAGNPPDV--IICSTGDMTLGAVEAVRGMGLSDKIKIIGYDAYPEVLKSIK 119
           +V++N+LTA     PDV  +     +M LGA+ A++  G SD + ++G+D  P+  K++ 
Sbjct: 196 NVMQNLLTAH----PDVQAVFAQNDEMALGALRALQTAGKSD-VMVVGFDGTPDGEKAVN 250

Query: 120 AGEITGIVEQSP----SKQIRTALRLAVENIRNGTKIES 154
            G++   + Q P    +K + TA     + +  G K+++
Sbjct: 251 DGKLAATIAQLPDQIGAKGVETA-----DKVLKGEKVQA 284