Pairwise Alignments

Query, 460 a.a., Fucose permease from Pseudomonas fluorescens FW300-N2E2

Subject, 387 a.a., L-fucose-proton symporter from Methylophilus sp. DMC18

 Score =  224 bits (572), Expect = 3e-63
 Identities = 137/386 (35%), Positives = 221/386 (57%), Gaps = 9/386 (2%)

Query: 64  AFIFVTSLFFMWGLSHGLLDVLNKHFQDTLHISRGQSGLVQTAYFGAYFIIALPVGLFME 123
           A   +T LFFM G    L D+L  + +    +S  Q+ L+Q  +F AY + ++P    +E
Sbjct: 5   ALTSLTILFFMMGFITCLNDILVPYLKAIFALSYAQAALIQFCFFAAYGLTSIPFSKLIE 64

Query: 124 RFGYKAGILAGLALFAIGALLFIPASMVGTFMPFLVALFVLACGLGCLETAANLYAAALG 183
           + GY+ G++ G AL A+G LLF PA ++ T+  FL ALFVLA G+  L+ AAN   + +G
Sbjct: 65  QVGYQKGMVIGFALAALGCLLFYPAVLLHTYGLFLAALFVLASGIVLLQVAANPCVSIIG 124

Query: 184 DPAKSEQRLTFAQSFNGLGAFIGPVIGGAVFFAPPIEFNGNRVDLVSVTYAALAIIVMLM 243
               +  RLT AQ+FN LG F+ P  G   +F      N +  + V   Y  +A +++++
Sbjct: 125 PKETASSRLTMAQAFNSLGTFVAPFFG--AYFILSGLTNSSYAEGVVYPYFLIASVLIVI 182

Query: 244 FVAFARIQLPEIRNEKSSDVLLPSAGEVSLWKKSNFTGALVAQFCNVGAYVGIGAFFINY 303
            V  +RI L  I + ++ +    S+    L +KS   G ++  F  VGA V IG+F +NY
Sbjct: 183 AVVLSRINLSGIESAEADE----SSWSEVLQEKSLLLG-VIGIFAYVGAEVSIGSFLVNY 237

Query: 304 AIDHWQGISAQKASYLLSLGMLAYMVGRFAGTWVMRYVPARSLLILNSLVSMVLCIVAIA 363
            +D    ++  +A+ L++L     M+GRF G + ++      +LI ++L+S+V  +V++ 
Sbjct: 238 VMD-ISHVAETQAAPLVALYWGGAMIGRFIGIFTLKAFAPAKVLITHALLSVVFILVSMQ 296

Query: 364 GFERISIFAVAAIYLFMSVMYPTIFAMGIRGLGTQTKKAGSCLVMT-LVGGAFVPLLMGA 422
               ++I  +  + L  S+M+PTIF +GI+GL    +K GS L+ T +VGGA +PLL G 
Sbjct: 297 SKGNLAIATMVLVGLCNSIMFPTIFTLGIKGLKAGQEKKGSGLLATAIVGGAVIPLLTGL 356

Query: 423 LADHFGIAAAFYVPLACFAAIAWYGL 448
           LAD  GI  AF +P+ C+A IA++G+
Sbjct: 357 LADRLGIHHAFVLPVICYAYIAYFGM 382