Pairwise Alignments

Query, 347 a.a., AraC family transcriptional regulator from Pseudomonas fluorescens FW300-N2C3

Subject, 335 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  221 bits (564), Expect = 2e-62
 Identities = 134/331 (40%), Positives = 189/331 (57%), Gaps = 11/331 (3%)

Query: 5   FESVLKNKNMAYRPLGAASASEAPIRVAFVLMDNFSMMSFTGAVDALVTANLMSDMPLYE 64
           F   +K KN+ Y  L   S   +  RV F+L+++FS+ +FT  +D  VTANL+    L+ 
Sbjct: 6   FSGGMKGKNLRY--LNETSQPASVARVGFLLLEHFSLPAFTQTLDTFVTANLLRP-DLFA 62

Query: 65  VLTVGVSGGQVTSDLGIVISTD--VELAQMPENQDVLIVAGGFRVKLQGHPLLRRKLRAN 122
             T G   G+V SDLG+VI  D  +++A + ++ ++L++ GGFR +L+        LR  
Sbjct: 63  SRTFGCDDGEVISDLGLVIRPDARIDVAAL-QDLELLVICGGFRTELKASEDFIHLLRGA 121

Query: 123 AASGAILGGLWNGVFFVADANLLDGFECAVHPESRAMMVEVFPHVKVSSRAYVVDRERVS 182
           A  G  L GLWNG +F+  A LL G+ CA+HPE R  + EV     V+S  YV+DR+R++
Sbjct: 122 AEQGISLAGLWNGAWFLGRAGLLQGYRCAIHPEHRPALGEVSKATHVTSEPYVIDRDRLT 181

Query: 183 CAGANSSLRMMLQLIRQTGGAALVGAIEEILRCDESGDDATDLPPVFVETDPTLPESLKL 242
            +  + +  M L  I+   G ALV  IE+IL  +ES       P   V     L E +K 
Sbjct: 182 ASSPSGAFHMALDWIKGLHGKALVEGIEDILAFEESRYRRIK-PTENVSVSAPLREVVK- 239

Query: 243 ALELMWQNVEEPLTIDELAACVKISKRQLERRFCSFLGATPTRYYLELRLTRARQLIQQT 302
              LM  N+EEPL +D+LA     S+RQLER F   LG TP RYY+ELR+T AR+L+Q T
Sbjct: 240 ---LMDANLEEPLELDQLAVYAGRSRRQLERLFKEQLGTTPQRYYMELRVTEARRLLQHT 296

Query: 303 NRSVTEIAVATGFVSSPHFQRRFRDFFGVPP 333
             S  E+ VA GFVS  HF + +  +FG  P
Sbjct: 297 ELSQVEVLVACGFVSPSHFSKCYSSYFGYRP 327