Pairwise Alignments

Query, 588 a.a., cytochrome C biogenesis protein CcmE from Pseudomonas fluorescens FW300-N2C3

Subject, 460 a.a., two component sensor kinase for C4-dicarboxylate transport from Agrobacterium fabrum C58

 Score =  211 bits (538), Expect = 4e-59
 Identities = 151/459 (32%), Positives = 228/459 (49%), Gaps = 37/459 (8%)

Query: 151 YAVGVTSGIPGYFLSSAVTGDNGEFLGAMVVKLEFPELEREWRQGSDTLLVSDARGIIFI 210
           YA+G  S  PG ++S  +   +G  LG ++ K+EF  LE +W  G   + V D  G++ +
Sbjct: 5   YALGNVSRRPGLYISRRIDASDGRPLGVVIAKVEFNRLESDWNIGGKPVYVVDRNGVVLM 64

Query: 211 ANRPGWRYRHLQPLTDSDRAELKATRQYDKQPLQALAHEPLRRFDDNSHLARVEAP-DGS 269
            + P WR++ + P+ ++ R  +  + Q+  + L  L     R   D   L  V+ P    
Sbjct: 65  TSVPEWRFKTVAPIDEARRKIIAESLQFGNETLATLPFRVARSSGDGVPLIHVDGPARAR 124

Query: 270 ADYLWESLPLSAEGWTLHLLR--RPQIAVEDLRNAGLAAAGLWLALVFLLLFLNQRWRLA 327
            DYL   +P+    WTLH L+   P + V+ +R   + A    + L+ L  F    WR  
Sbjct: 125 GDYLQLEVPVPTTSWTLHYLQPVAPALNVK-IREGRVVALATLMPLMALSAF--WLWRRH 181

Query: 328 KL------RQRSREELERLVEERTRD---------------------LRTAQDGLVQSAK 360
           K        QR+R ELE  V+ERTRD                     LR  Q  LVQ+ +
Sbjct: 182 KALREKEEEQRARAELEMKVQERTRDLTKTRDHLQAEITLHEKTTGELRNVQHELVQANR 241

Query: 361 LAALGQMSAALAHEINQPLTAQRMQLATLRLLLDHGRVDDAYKALKPVDDMLTRMAALTG 420
           L+ LGQ++A +AHEINQP+   R      R LL   R+ +A + L+ +  +  R+  +T 
Sbjct: 242 LSILGQVAAGVAHEINQPVATIRAFADNARTLLKRDRLAEANENLEDIAALTERIGTITT 301

Query: 421 HLKTFARKSPSGLRERLDLAAVVDQALQLLDTRLRDEQVSTVLHL-TRPAWVRGDAIRLE 479
            LK  ARK  +   E +    V++ A+ LL +R   +  +  + L  +   V G  IRLE
Sbjct: 302 DLKILARKGRTA-AEPVSARLVIEGAVVLLRSRFSGQMDALDIVLPDQDLKVLGSRIRLE 360

Query: 480 QVLINLLRNALDAMAGQPLKRLEVRLEADDQLWRLTVSDSGTGIAEEHLGQVFDPFFTTK 539
           Q+LINLL+NAL+A       R+EVR+  +  +  ++VSD+G GI E    Q+F PF T+K
Sbjct: 361 QILINLLQNALEATETIETARVEVRVREEGDMVVISVSDNGAGIPEAIRAQLFSPFNTSK 420

Query: 540 PVGDGLGLGLAVSFAIIHESGGRLSADNHENGAVFCVTL 578
               GLGLGL +S  I  + GGR+   +   G  F V L
Sbjct: 421 E--SGLGLGLVISNDIASDYGGRIEVTSSGAGTSFSVYL 457