Pairwise Alignments

Query, 790 a.a., ligand-gated channel from Pseudomonas fluorescens FW300-N2C3

Subject, 703 a.a., Ferric hydroxamate outer membrane receptor FhuA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  265 bits (676), Expect = 8e-75
 Identities = 199/666 (29%), Positives = 321/666 (48%), Gaps = 65/666 (9%)

Query: 148 ANSVVAQELWVGGKVATSILNTPASVSVVTDKEMKQRSVSTTEELLQYTPGVITDYYGTD 207
           A ++ A+      K  T I  TP SVSVVT++EM+     + +E L YTPGV     G  
Sbjct: 32  APTIAAKRSATTTKTDTPIEKTPQSVSVVTNEEMQMHQFQSVKEALGYTPGVTVSSRGAS 91

Query: 208 DRNDYFQIRGFQAT-----TYRDGLTLGS--MRGVREEPFAYERVEVIRGANSTLFGPAD 260
           +  D+  IRGF +       Y DGL L          +P+  ERVE++RG  S L+G ++
Sbjct: 92  NTYDFVIIRGFSSVGLSQNNYLDGLKLQGNFYNDAVIDPYMLERVELMRGPTSVLYGKSN 151

Query: 261 PGGSVNFVSKKPRFDKFGQGYVTYGSFDHVETGIDVGDSLNEDKTVAGRFTAKMQDSDRE 320
           PGG ++ VSK+P  +   +     G+ +  +TG D  DSL+++   + R T   + ++ +
Sbjct: 152 PGGIISMVSKRPTTEPLKEIQFKMGTDNLFQTGFDFSDSLDDNGEFSYRLTGLARSTNEQ 211

Query: 321 YDHSRDDNKFLMGGLTWSPTDFTSASVIVDYLKTQSSPNSGGY------------PLDKE 368
              S      +    TW P + T+ + +  +   Q+ P +G Y            P  K 
Sbjct: 212 QKSSESQRYAIAPSFTWRPDEKTNFTFLSYF---QNEPETGYYGWLPKEGTVEPLPNGKR 268

Query: 369 YDRDKFYGEPSYNFHDVERTNISGTFSHDFDNGFVLRSNLRYSELTDDFGYVFLSDSPTR 428
              D F    S N +      +  +F H F++ F +R NLR+ E+      V+       
Sbjct: 269 LPTD-FNEGASNNTYSRNEKMVGYSFEHGFNDTFTVRQNLRFVEMKTAQKSVY-GTGIAA 326

Query: 429 TGTTVPRYIFGTDSDAEQL-NGNLMLQYDARFE--NIDSSTLVGVEYGDSSTEERSVYAT 485
            G T+ R   GT  D E+L N ++  Q +++F   +ID + L GV++     +  + + +
Sbjct: 327 DGHTLNR---GTIVDNERLQNFSVDTQLESKFATGDIDHTLLTGVDFMRMRNDINATFGS 383

Query: 486 TGSIDLAN---PVFTGVPSGVAPYSNDKLDTKTKAVFLQQNLSFYERFIVTAGVRND-SL 541
             SIDL N   P +     G  PY  +  ++K   +++Q     + +++ T G R D S 
Sbjct: 384 APSIDLYNNYHPEYFAF-GGAEPYQMN--ESKQTGLYVQDQAE-WNKWVFTLGGRYDWSK 439

Query: 542 DLSSTDINNVKASDNFSET-----SYRGALTYIVNDEVSTYVSMVESVSP--------PT 588
             ++   N+   ++ + E      ++RG + Y+ ++ +S Y S  +S  P        P 
Sbjct: 440 QATTVRQNSTTPTEGYIERNDHQFTWRGGVNYVFDNGISPYFSYSQSFEPSAFDLWSTPR 499

Query: 589 VGVVPKTGRQYEVGVKYAPIGMDALFSAAVYDLTQENVSIAVVLPSGVIEQQTVGESRVR 648
           V   P  G QYE GVKY P  M  + + AVY LT+ N   A   P+  + Q   GE R R
Sbjct: 500 VSYKPSKGEQYEAGVKYVPKDMPVVVTGAVYQLTKTNNLTAD--PTNPLAQVPAGEIRAR 557

Query: 649 GLDLEAKAELTPNLSLVGGYSYMESEVLRGTLYDGSSLKGNEFATAPKHSASLWSYYNI- 707
           G++LEAKA LT N+++   Y+Y ++E  + T     +LKGN     P+H ASLW  Y   
Sbjct: 558 GVELEAKAALTANINMTASYTYTDAEYTKDT-----NLKGNTPEQVPEHMASLWGDYTFN 612

Query: 708 --PDTDVSVGLGARYVGSYYFDAANTGTSDGTTLFDAAFNYKLFK----GTDLAINVSNL 761
             P + +++G G R++GS Y D AN+       + DA   Y L +    G+ +A+NV+NL
Sbjct: 613 EGPLSGLTLGTGGRFIGSSYGDPANSFKVGSAAVMDAVVKYDLARFGMAGSSIAVNVNNL 672

Query: 762 LDEQHV 767
           LD ++V
Sbjct: 673 LDREYV 678