Pairwise Alignments

Query, 790 a.a., ligand-gated channel from Pseudomonas fluorescens FW300-N2C3

Subject, 819 a.a., TonB-dependent receptor from Agrobacterium fabrum C58

 Score =  261 bits (667), Expect = 1e-73
 Identities = 225/811 (27%), Positives = 354/811 (43%), Gaps = 63/811 (7%)

Query: 26  SSYALPTLAQPSTVEQTHPVHQWNIPAGPLAPALDRFAREAGISLSFDASSVANRNTRGV 85
           +S A   LA  S+         ++IPAG L   L RF   +GI + ++++    R+T G+
Sbjct: 26  ASIAFSALAMTSSTVFAQQSVSYSIPAGSLERGLIRFGAASGIQVLYNSAVANGRDTAGI 85

Query: 86  SGTLDTPEALSSLLQGSDMAIQQQGPNAYLLTPQTKADSELEDYRLAPILVNAKARIDGT 145
           SG L    AL  LL  + +  +  GP +  +     A   + D   A IL      + G 
Sbjct: 86  SGPLSPEAALQGLLANTGLTYRFTGPKSVTVADPAPAPGAVTD-ESATILQTIT--VQGA 142

Query: 146 EDA----NSVVAQELWVGGKVATSILNTPASVSVVTDKEMKQRSVSTTEELLQYTPGVIT 201
           E A    + +VA     G K  T ++  P S+SV+T  E+K R   T +E + YT GV  
Sbjct: 143 ESAYGHVDGIVASRSATGTKTDTPLIEVPQSISVITADEVKARGAETIKEAVNYTAGVHV 202

Query: 202 DYYGTDDRN-DYFQIRGFQATT-YRDGLTL---GSMRGVRE-EPFAYERVEVIRGANSTL 255
                  R  D  +IRGF  T  Y DG  L   G + G  + +P+  ER+EV++G +S L
Sbjct: 203 GGSSASTRAFDNIEIRGFAPTPLYLDGTYLPYIGDLGGSPQIDPYLLERIEVLKGPSSVL 262

Query: 256 FGPADPGGSVNFVSKKPRFDKFGQGYVTYGSFDHVETGIDVGDSLNEDKTVAGRFTAKMQ 315
           +G   PGG +N VSK+P    F +     G+        D    +  +     R T    
Sbjct: 263 YGQNYPGGMINMVSKRPTDKPFNEVVAGTGTDGRAYGAFDFSGPVAGNDAFLYRLTGVAT 322

Query: 316 DSDREYDHSRDDNKFLMGGLTWSPTDFTSASVIVDYLKTQSSPNSGGYPL--------DK 367
            +    D+++D+   L       P + T+ + +  Y K    P+    P           
Sbjct: 323 RTGTNIDYTKDERFMLAPSFALKPDEDTTFTFLSHYQKDNGVPDYQPLPYIGTVKAGPYG 382

Query: 368 EYDRDKFYGEPSYNFHDVERTNISGTFSHDFDNGFVLRSNLRYSELTDDFGYVFLSDSPT 427
             +RD F GEP+YN +D  +  +   F H FD+ + +R N +Y  + D +   F S    
Sbjct: 383 AINRDFFTGEPAYNGYDRGQAVLGYEFKHQFDDVWSIRHNAKYISVDDSY-RTFFSGGYV 441

Query: 428 RTG-----TTVPRYIFGTDSDAEQLNGNLMLQYDARFENIDSSTLVGVEYGDSSTEERSV 482
            TG     T + R      S+ +    +  LQ +     +  + +VG +Y     +    
Sbjct: 442 ETGGVTDYTKMRRNAIDYSSNNQVFATDTNLQAEFSTGEVGHTVIVGTDYKWFRNDYTGR 501

Query: 483 YATTGS-IDLANPVFTGVPSGVAPYSNDKLDTKTKAVFL-QQNLSFYERFIVTAGVRND- 539
           Y    + +D+ NP +    S   P    + D +   + L  Q+   ++ +I+T G R D 
Sbjct: 502 YGFGNTPLDVFNPRY---GSYREPTVGARWDNRISQLGLYAQDQIKWDNWILTLGGRYDW 558

Query: 540 SLDLSSTDINNVKASDNFSETSYRGALTYIVNDEVSTYVSMVESVSP------PTVGVVP 593
           +L   +  +++       +  + R  L Y+ ++  + YVS   S  P            P
Sbjct: 559 ALQTDNDILSSTIGKKTDTAFTGRAGLIYLFDNGFAPYVSYSTSFMPYSGFDGQNNPFKP 618

Query: 594 KTGRQYEVGVKYAPIGMDALFSAAVYDLTQENVSI---AVVLPSGVIEQQTVGESRVRGL 650
            TG Q+EVG+KY P+G DAL + + +DL Q+NV        LP+        GE  V+G+
Sbjct: 619 TTGEQWEVGLKYEPVGYDALITVSAFDLKQKNVPTYDEFTYLPA------QTGEIHVQGI 672

Query: 651 DLEAKAELTPNLSLVGGYSYMESEVLRGTLYDGSSLKGNEFATAPKHSASLWSYYNIPD- 709
           ++E KA +  +L L+   SY +S   +    DG+  +GN+    P  + SLW  Y I D 
Sbjct: 673 EIEGKATVFDSLDLIAAASYTDSVYSKAD--DGT--QGNKVRFMPPVNVSLWGKYRIEDG 728

Query: 710 --TDVSVGLGARYVGSYYFDAANTGTSDGTTLFDAAFNYKLFK------GTDLAINVSNL 761
               +  G G R+  S Y DAAN+      T+ DAA +Y   K      G +L +   NL
Sbjct: 729 PLEGLGFGAGVRHSSSGYGDAANSFKYPAYTVVDAALSYDFGKQNPKLEGLELNVTAQNL 788

Query: 762 LDEQHVVGSGTAN--YYNPGREVTAKLSYNW 790
            D+ +V G    N  +Y   R V A LSY W
Sbjct: 789 FDKTYVSGCSNINSCFYGKSRAVYANLSYKW 819