Pairwise Alignments

Query, 790 a.a., ligand-gated channel from Pseudomonas fluorescens FW300-N2C3

Subject, 729 a.a., ferrichrome iron receptor from Agrobacterium fabrum C58

 Score =  257 bits (657), Expect = 1e-72
 Identities = 206/708 (29%), Positives = 323/708 (45%), Gaps = 61/708 (8%)

Query: 131 LAPILVNAKARIDGTEDANSVVAQELWVGGKVATSILNTPASVSVVTDKEMKQR-SVSTT 189
           L  I V  +   + T      VA++   G K  T     P SVSVV  +EM  R +V+  
Sbjct: 35  LKQITVEGQGAENATGPVRGYVAKKSATGSKTETETKAIPQSVSVVGRQEMDDRGAVTKI 94

Query: 190 EELLQYTPGVITDYYGTDDRNDYFQIRGFQAT---TYRDGLTLGS--MRGVREEPFAYER 244
           +E+L+YTPGV  + +GTD   D+F IRGFQAT    + DGL L S    G + + +  ER
Sbjct: 95  DEVLRYTPGVTAEPFGTDPDTDWFYIRGFQATQTGVFLDGLNLFSYGFGGFQMDAYGLER 154

Query: 245 VEVIRGANSTLFGPADPGGSVNFVSKKPRFDKFGQGYVTYGSFDHVETGIDVGDSLNEDK 304
           VEV++G  S L+G A+PGG V  VSK+ +     +  +   +F +   G D+GD ++ + 
Sbjct: 155 VEVLKGPASVLYGGANPGGIVQMVSKRAQDTPVRETEIGINNFGNAFFGFDLGDKVDAEG 214

Query: 305 TVAGRFTAKMQDSDREYDHSRDDNKFLMGGLTWSPTDFTSASVIVDYLKTQSSPNSG--- 361
               R T K+   D   D+S D   F+M  +T+ P   TSA+ +  Y       + G   
Sbjct: 215 VWKYRVTGKVSGGDNYTDYSEDLRGFIMPQITFEPDAQTSAT-LYGYFSALDQVHVGNGF 273

Query: 362 ----GYPLDKEY---DRDKFYGEPSYNFHDVERTNISGTFSHDFDNGFVLRSNLRYSEL- 413
               G  +D  +   DR  FYGEP  +   V ++ +    SH+FDNG+ +  N RY  L 
Sbjct: 274 LPYVGTVVDAPFGKLDRKAFYGEPDIDNGRVYQSMVGYDVSHEFDNGWKISQNARYGHLY 333

Query: 414 -------------TDDFGYVFLSDSPTRTGTTVPRYIFGTDSDAEQLNGNLMLQYDARFE 460
                         D  G   L   P      + R  FG D  ++  +  +  + + +F+
Sbjct: 334 KHETGPYPGGWANADANGQPIL--DPITNDYMLTR--FGYDGLSKVDSFGVDNRIEGQFD 389

Query: 461 N--IDSSTLVGVEYGDSSTEERSVYATTGSIDLANPVFTGVPSGVAPYSNDKLDTKTKAV 518
              ++ S L G++Y     ++      + +I    PV+         Y+++ +  +   +
Sbjct: 390 TGAVNHSPLFGLDYKYYRLDQVQACCGSNAIGALKPVYGSTQGTNFVYADNIVTQQQIGI 449

Query: 519 FLQQNLSFYERFIVTAGVRNDSLDLSSTDINN-----VKASDNFSETSYRGALTYIVNDE 573
           + Q  L F + ++VT   R D +D   T++NN     V    N    S R  L Y  ++ 
Sbjct: 450 YAQDQLRFGDGWLVTLNGRYDYVD---TELNNRLPAGVSRRSNDDALSGRAGLAYEFDNG 506

Query: 574 VSTYVSMVESVSP------PTVGVVPKTGRQYEVGVKYAPIGMDALFSAAVYDLTQENVS 627
           ++ YVS     +P            P+ G Q+E G+KY P   D   +A+V+ L ++N +
Sbjct: 507 LTPYVSAATFFNPLIDTLADGTPASPEEGHQFEAGIKYEPSFFDGSITASVFKLVKDN-A 565

Query: 628 IAVVLPSGVIEQQTVGESRVRGLDLEAKAELTPNLSLVGGYSYMESEVLRGTLYDGSSLK 687
           I      GV      G+    G +LEAKA L  N   +  YSY + ++ +       +L 
Sbjct: 566 IVSYTAGGVTTSGQFGQVESTGFELEAKANLDENWKALASYSYTDLDITKDA---NPNLI 622

Query: 688 GNEFATAPKHSASLWSYYNIPD---TDVSVGLGARYVGSYYFDAANTGTSDGTTLFDAAF 744
           G      P H+ASLW  Y   D     +S+G G RY G  + DAANT       +FDAA 
Sbjct: 623 GKSPWIVPAHTASLWVDYAFTDETFEGLSIGGGVRYQGKSWADAANTLRVSDAAVFDAAI 682

Query: 745 NYKLFKGTDLAINVSNLLDEQHVVGSGTANY--YNPGREVTAKLSYNW 790
            Y+    T  ++NV+N+ D+++V      +   +   R +T KLS  W
Sbjct: 683 RYEKNDWT-ASVNVANVFDKEYVKSCAGVSVCGWGDSRTITLKLSKKW 729