Pairwise Alignments

Query, 712 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2C3

Subject, 626 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  265 bits (678), Expect = 4e-75
 Identities = 172/530 (32%), Positives = 290/530 (54%), Gaps = 26/530 (4%)

Query: 184 RASEYYLCSQDSKKACVIDPAPYRVGSTMTMLASFIEPIMIDGKFQGIVGADLSVNFIQD 243
           R   +Y  +  + K  +  P    VG  +  +A    P+  +G+  G+VG DLS+  +  
Sbjct: 122 RQRPWYKQAVAADKPMLTPPYMAAVGGQIVTIAM---PVKKNGELLGVVGGDLSLQTLVK 178

Query: 244 MLVAADGKLYDGAGEMALLSSNNRLVAFTKDPSKLGEKASDLLDASELDNLAKLGVGEVR 303
           ++ + D   + G G   L+SS+ +++  + +  ++ +   D+   +++  + K+    V 
Sbjct: 179 IINSVD---FGGIGHAFLVSSDGQVIV-SPEQDQVMKNLKDIYPGTQV-RIEKVSQDVVL 233

Query: 304 YDIDEEHGHIEVYMPFGIGETNARWTLMLQLPLNAVMADLQALQQDLDHQRQADIFGMAM 363
              D     I  + P   G   A W + L +  +   A L   +              A+
Sbjct: 234 NGQDR----ILSFTPIS-GLPGADWYIGLSIDKDKAYAPLGKFRTS------------AL 276

Query: 364 VGLVIAGIGLLVIW-LVGHGIARPLKQMVAMLDDIAQGEGDLTRRLVSDRADELGAIARG 422
           + ++IA + + V+  L+   + RPL  M   + DIAQGEGDLTRRLV    DE G +   
Sbjct: 277 IAMLIAVVAIAVLLSLLIQVLLRPLTTMGVAMQDIAQGEGDLTRRLVVTSKDEFGEVGSA 336

Query: 423 FNTFLSKLQGMITQVVTSVQSVSDSSEHTADIAIRTNQGVHKQMSEIDQVATAVHEMTAT 482
           FN F+ ++   I++V ++ + V D S+     +  +  G  +Q +  + VA A++E+ A 
Sbjct: 337 FNQFVERIHASISEVSSATRQVHDLSQRVMASSNASIIGSDEQSARTNSVAAAINELGAA 396

Query: 483 AQDVARNATQAAQAASHADQAASQGMQIVRDTSTSIGALAVEIGKAVGVVQTLAKDSENI 542
            Q++ARNA  A+Q AS A + A  G ++V  T  ++  L+ +I  +   ++TL   ++NI
Sbjct: 397 TQEIARNAADASQHASGASEQADDGRKVVEQTILAMSELSQKISLSCTQIETLNASTDNI 456

Query: 543 NAILTAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQQATEEIQAMI 602
             IL  I+GI++QTNLLALNAAIEAARAGE GRGFAVVADEVRNLA +TQ++ EEI  MI
Sbjct: 457 GHILDVIKGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAEEIHKMI 516

Query: 603 QQLQQGTRDVVRVMEDSQHRTDESVQHAAKAAQALETITQAVSVINDMNTQIASAAEEQS 662
             LQ G+R+ V  M  SQ  ++ESV+ A +A + L ++TQ +  I+ MN  +A+A EEQ+
Sbjct: 517 TSLQVGSREAVTTMNASQTSSEESVEVANQAGERLVSVTQRIVEIDGMNQSVAAATEEQT 576

Query: 663 AVADDINRNVINIGQVANEVASGADESSAASAGLTKLAEQQRRLINQFRV 712
           AV + +N ++  I  +  +  +  +E+      L++ A + ++L++ F++
Sbjct: 577 AVVETLNVDINQINLLNQQGVANLNETLKDCDALSQQANRLKQLVDSFKI 626