Pairwise Alignments

Query, 464 a.a., Fis family transcriptional regulator from Pseudomonas fluorescens FW300-N2C3

Subject, 483 a.a., two component response regulator from Agrobacterium fabrum C58

 Score =  297 bits (761), Expect = 5e-85
 Identities = 182/473 (38%), Positives = 259/473 (54%), Gaps = 24/473 (5%)

Query: 1   MAIKVLLVEDDRALREALADTLVLAGHDYAAVGSAEEALQAVGREAFSLVVSDVNMPGMD 60
           M   +L+ +DD A+R  L   L  AG+D     +A    + V      LVV+DV MP  +
Sbjct: 1   MTATILVADDDAAIRTVLNQALSRAGYDVRITSNAATLWRWVSAGEGDLVVTDVVMPDEN 60

Query: 61  GHQLLGLLRARQPQLPVLLMTAHGAVERAVDAMRQGAADYLVKPFEPKALLDLVARHA-- 118
              LL  ++  +P LPVL+M+A      A+ A  +GA DYL KPF+   L+ ++ R    
Sbjct: 61  AFDLLPRIKKARPDLPVLVMSAQNTFMTAIKASEKGAYDYLPKPFDLTELIAIIGRALSE 120

Query: 119 -------LGSLAVEGEGPVAIEPASAQLLELASRVARSDSTVLISGESGTGKEVLARYIH 171
                  L     +G   V    A  ++  + +R+ ++D T++I+GESGTGKE++AR +H
Sbjct: 121 PKRKPAKLDDDMQDGMPLVGRSAAMQEIYRVLARLMQTDLTLMITGESGTGKELVARALH 180

Query: 172 QQSRRAGEPFIAINCAAIPDNMLEATLFGHEKGSFTGAIAAQAGKFEQADGGTILLDEIS 231
              +R   PF+AIN AAIP +++E+ LFGHEKG+FTGA     G+FEQA+GGT+ LDEI 
Sbjct: 181 DYGKRRNGPFVAINMAAIPRDLIESELFGHEKGAFTGAQNRSTGRFEQAEGGTLFLDEIG 240

Query: 232 EMPLGLQAKLLRVLQEREVERVGARKPISLDIRVVATTNRDLAGEVAAGRFREDLYYRLS 291
           +MP+  Q +LLRVLQ+ E   VG R PI  D+R+VA TN+DL   +  G FREDLYYRL+
Sbjct: 241 DMPMDAQTRLLRVLQQGEYTTVGGRTPIRTDVRIVAATNKDLKQSINQGLFREDLYYRLN 300

Query: 292 VFPLAWRPLRERTADILPLAERLLNKHVNKMKHAAARLSAEARACLVAYPWPGNVRELDN 351
           V PL   PLR+R  DI  L    +     K      R   EA   + AY WPGNVREL+N
Sbjct: 301 VVPLRLPPLRDRAEDIPDLVRHFIQTG-EKEGLEGKRFETEALEVMKAYAWPGNVRELEN 359

Query: 352 AIQRALILQQGGLIQPE--DFCLAGPVACAPLPALAPAPTATPVPPMDVEG--DSVGALG 407
            I+R + L    +I  E  +  L   V  +PL  +A    +  +     E   D   + G
Sbjct: 360 LIRRLMALYPQEVITREIIEQELQSDVPDSPLDKMAVRTGSLTISQAVEENMRDYFASFG 419

Query: 408 DD----------LRRREFQMIIDTLRAERGRRKEAAERLGISPRTLRYKLAQM 450
           D           LR  E+ +I+  L A RG + +AA+ LG++  TLR K+ ++
Sbjct: 420 DGLPPPGLYDRVLRELEYPLILAALTATRGNQIKAADLLGLNRNTLRKKIREL 472