Pairwise Alignments

Query, 294 a.a., flagellar motor protein MotD from Pseudomonas fluorescens FW300-N2C3

Subject, 220 a.a., porin from Agrobacterium fabrum C58

 Score = 70.9 bits (172), Expect = 2e-17
 Identities = 41/125 (32%), Positives = 71/125 (56%), Gaps = 7/125 (5%)

Query: 120 MTVRGNELWVEIELNSSLLFGSGDAMPSDMAFNIIDKVAAILKPFDNP-IHVEGFTDDQP 178
           +T RG+   + + + S++ F +         +  +D VA +L  F+   I + G TD   
Sbjct: 98  VTRRGDS--IVLNMPSNITFATDQDQVIPPFYQTLDSVAIVLNKFNRTLIDINGHTDS-- 153

Query: 179 IRTAQYPTNWELSSARSASIVRMLAMQGVNPGRLASVGYGEFQPVANNATAEGRARNRRV 238
             T     N  LS  R+AS+   L  +GV+  R++++G+G  QP+A+NAT++GRA+NRRV
Sbjct: 154 --TGSLQHNQALSERRAASVANYLGARGVDQRRISTLGFGPSQPIASNATSDGRAQNRRV 211

Query: 239 VLVVS 243
            +++S
Sbjct: 212 EVLIS 216