Pairwise Alignments

Query, 380 a.a., transporter from Pseudomonas fluorescens FW300-N2E3

Subject, 378 a.a., Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  278 bits (711), Expect = 2e-79
 Identities = 158/368 (42%), Positives = 221/368 (60%), Gaps = 7/368 (1%)

Query: 15  NQQPKKV--LVRVDRVTKKFDETIAVDDVSLDIHQGEIFAMLGGSGSGKSTLLRMLAGFE 72
           N QP+ +  LV +  ++K FD    +  + L I+ GE   +LG SG GK+T+LR++AG E
Sbjct: 8   NNQPRSLSPLVLLSGISKSFDGKEVISQLDLTINNGEFLTLLGPSGCGKTTVLRLIAGLE 67

Query: 73  RPTEGRIYLDGVDITDMPPYERPINMMFQSYALFPHMTVAQNIAFGLKQDRLPASEIEAR 132
               G I LD  DIT +P   R +N +FQSYALFPHMTV +N+AFGL+  + PA+EI  R
Sbjct: 68  TVDAGHIMLDNQDITHVPAENRYVNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEIAPR 127

Query: 133 VEEMLKLVHMTQYAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRSQMQ 192
           V + L++V + ++A+RKPHQLSGGQ+QRVA+AR++  +P+LLLLDE + ALD KLR QMQ
Sbjct: 128 VTDALRMVQLEEFAQRKPHQLSGGQQQRVAIARAVVNKPRLLLLDESLSALDYKLRKQMQ 187

Query: 193 LELVEIIERVGVTCVMVTHDQEEAMTMAQRIAIMHLGWIAQIGSPVDIYEAPVSRMVCEF 252
            EL  +  ++G+T V VTHDQEEA+TM+ RI +M  G I Q G+P +IYE P +  V  F
Sbjct: 188 NELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRNGVIEQDGTPREIYEEPKNLFVAGF 247

Query: 253 IGNVNAFDGTVVEDLEGHAIIHSPD-LEQKIYVGHGVSTSVQDKSITYAIRPEKMLVSTL 311
           IG +N FD TV+E L+   +  S +  E  IYV   V      + +   +RPE + V  +
Sbjct: 248 IGEINRFDATVIERLDEQRVRASVEGRECNIYVNFAVEPG---QKLNVLLRPEDLRVEEI 304

Query: 312 KPDTRYNWSQGKVHDIAYLGGHSVFYVELPGGKIVQ-SFMANAERRGTRPTWDDQVYVWW 370
             D       G V +  Y G      VEL  GK+V  S   N +      + D ++ + W
Sbjct: 305 NDDNHIEGLIGYVRERNYKGMTLESVVELENGKMVMVSEFFNEDDPDFDHSLDQKMAISW 364

Query: 371 EDDSGVVL 378
            +   VVL
Sbjct: 365 VESWEVVL 372