Pairwise Alignments

Query, 270 a.a., exonuclease III from Pseudomonas fluorescens FW300-N2E3

Subject, 265 a.a., putative Exodeoxyribonuclease III from Pseudomonas putida KT2440

 Score =  159 bits (403), Expect = 4e-44
 Identities = 107/270 (39%), Positives = 145/270 (53%), Gaps = 16/270 (5%)

Query: 1   MKIVSFNINGLRARPHQLAALIEKHQPDVIGLQETKVDDVQFPLAELEALGYHVGFHGQK 60
           +KI +FNING+R+R   L A +E+ QPD+  LQE K  D QFP AELEA GY    HGQ 
Sbjct: 4   LKIATFNINGIRSRLPALLAWLEREQPDIACLQELKAADQQFPRAELEAAGYGSLHHGQP 63

Query: 61  GHYGVALMSRQA-PLALHKGFASDEEDAQRRFIWGTFADANGVPVTIMNGYFPQGESRDH 119
              GVA++ R + PL + +G    EED+Q R++    A A+GV V  +  Y P G     
Sbjct: 64  SWNGVAILVRGSDPLEVRRGLPGLEEDSQSRYL---EAAAHGVLVACL--YLPNGNPLPG 118

Query: 120 PTKFPAKERFYNDLQTLLETQFSNDQPLVVMGDVNISPEDCDIGIGPDNMKRWLKTGKCS 179
           P KF  K  ++  L     +   +  P ++ GD N+ P D DI     N + WLK     
Sbjct: 119 P-KFDYKLHWFECLIQHARSLQESGHPTLLAGDFNVVPTDMDI----YNPRSWLKDALLQ 173

Query: 180 FLPEEREWMARLKNWGLVDSFRHLNPDVTDRFSWFDYRSRGFEDEPKRGLRIDLILASQG 239
             PE R    RL + G +D+ RHL PD      W  +R+    +    GLRID +L ++ 
Sbjct: 174 --PESRACYQRLLDQGWLDAIRHLYPDERVYTFWDYFRNHWARN---AGLRIDHLLLNRE 228

Query: 240 LLPRVKAAGVDYELRGMEKPSDHAPIWLEL 269
           L P +K AGVD  +R   K SDHAP+W+EL
Sbjct: 229 LAPYLKRAGVDAWVRNQAKASDHAPVWIEL 258