Pairwise Alignments

Query, 335 a.a., NADH:ubiquinone oxidoreductase from Pseudomonas fluorescens FW300-N2E3

Subject, 307 a.a., hydrogenase 3, membrane subunit from Escherichia coli BL21

 Score = 67.8 bits (164), Expect = 3e-16
 Identities = 79/314 (25%), Positives = 127/314 (40%), Gaps = 42/314 (13%)

Query: 13  IAVLKAIVILLAVVVCGALLSWVERRLLALWQDRYGPNRVGPFGAFQIAADMIKMFFKED 72
           ++VL  ++  L +     LLS + R   A   +R GP      G  Q   DM K+  ++ 
Sbjct: 1   MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGP------GVLQEYRDMFKLLGRQS 54

Query: 73  WTPPFADKVIFTLAPVVAMSALLIAFAIIPI----TPTWGVADLNIGILFFFAMAGLSVY 128
              P A   +F L P V +  +L     +P+    +P   + DL I +L+ FA+A    +
Sbjct: 55  -VGPDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDL-ITLLYLFAIAR---F 109

Query: 129 AVLFAGWSSNNKFALLGSLRASAQTVSYEVFMGLSLMGIVIQVGSFNMRDIVDYQAQHLW 188
               +G  + + F  +G+ R +   V  E  + L L       GS N+ +I D    + W
Sbjct: 110 FFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNITD--TVYHW 167

Query: 189 FV---IPQIFGFLTFFIAGVAVTHRHPFDQPEAEQELADGYHIEYAG-----MKWGMFFV 240
            +   IP +        A      + PFD  EAEQEL +G   EY+G     MKWG    
Sbjct: 168 PLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFGVMKWG---- 223

Query: 241 GEYIGIVLISALLVTLFFGGWHGPFGILPQ-------IPFIWFALKTAFFIMFFILLRAS 293
                 + +  L+V   F G   P+G +         +  +   +K    ++   L   S
Sbjct: 224 ------ISLKQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFENS 277

Query: 294 IPRPRYDQVMDFSW 307
           + R R D     +W
Sbjct: 278 MARLRLDITPRITW 291