Pairwise Alignments

Query, 1185 a.a., host specificity protein from Pseudomonas fluorescens FW300-N2E3

Subject, 1200 a.a., hypothetical protein from Pseudomonas simiae WCS417

 Score = 1397 bits (3616), Expect = 0.0
 Identities = 712/1211 (58%), Positives = 881/1211 (72%), Gaps = 43/1211 (3%)

Query: 1    MGAAQKIDIYGEKGGSSKPKSPVEASDSLRSTNLAKMLIAVGEGEFDEVPTDYSIFLDNT 60
            MGAA+KID+YG KGGS KPK+P EA DSLRS  +AKMLIAVGEGEFD VPT   IFLDNT
Sbjct: 1    MGAARKIDVYGAKGGSEKPKTPTEAPDSLRSVAIAKMLIAVGEGEFDGVPTAKDIFLDNT 60

Query: 61   PIRDASGNYNFPNVKWDWRSGSVDQSYIPGIPAVENETSLNVELRSDSPWVRSITNTQLS 120
            P++D  GN NFPNVKW+WRSG+VDQSYI GIP+VENET+++ ELRS +PWVR+ITNTQLS
Sbjct: 61   PLQDPQGNMNFPNVKWEWRSGAVDQSYIQGIPSVENETTISTELRSGTPWVRAITNTQLS 120

Query: 121  AIRMRFAWPALQRQDDEGNVVGYRIDYAIDLATDGGAYQQVYPGAVDGKTTTRYERSVRV 180
            A+R+RFAWPALQ  D  GN+ GY I Y ++LATDGG YQ+V   AV GKTT+ YER+ R+
Sbjct: 121  AVRVRFAWPALQSVDSGGNINGYTIGYKVELATDGGTYQEVLNEAVSGKTTSLYERTRRI 180

Query: 181  DLPDATSGWLIRVRRLTPNQNSNKIADTMLIAGITEVIDAKLRYPNTALLYIEFDAEQFT 240
            +LP +T+GWL+R+ RLT NQN+NKI+DTM IAG TEVIDAK+RYPNTALLYIEF AEQF 
Sbjct: 181  NLPRSTTGWLLRITRLTANQNNNKISDTMQIAGFTEVIDAKIRYPNTALLYIEFSAEQFR 240

Query: 241  NIPAVTVRCRARKWQVPSNYDPMSRTYTGTWDGTMKQAWTNNPAWITYGICTEDRFGLGK 300
            +IPAVT+ C  RKWQVPSNYD  SRTYTG WDGT K+AWT+NP W TYGI T DRFGLG+
Sbjct: 241  SIPAVTIECDGRKWQVPSNYDTRSRTYTGVWDGTFKEAWTDNPVWHTYGITTNDRFGLGR 300

Query: 301  RIKSFMVDKWELYRIAQYCDQLVPNGLGGTEPRFLCDMNLQGKADAWSLLRDIAGIYRGM 360
            RIK +MVDKWELYRI+QYCDQLVP+G GG EPRF+C++NLQ KADAWSLLRDI+ IYRGM
Sbjct: 301  RIKPWMVDKWELYRISQYCDQLVPDGKGGQEPRFICNLNLQSKADAWSLLRDISTIYRGM 360

Query: 361  TYWAQGQLVMQADMPRAQDFDYVFTRANVIDGKFSYGSASAKTRYTRALVSYDNPANNYD 420
            TYWAQGQ+   ADMPRA DFD+ +TRANVIDGKF+Y SAS +TRYTRAL+SYDNP NNYD
Sbjct: 361  TYWAQGQVFTLADMPRATDFDFAYTRANVIDGKFTYSSASERTRYTRALISYDNPLNNYD 420

Query: 421  TDVIPFADLALQRRMGDKPTELSAIGCTRASEAQRRGKWAILSNNQDRTVSFKAGMEGVI 480
            TDV    D  LQRR GD P E+SAIGCTR SEAQRRGKWA+L+N++DR V+FK G++G I
Sbjct: 421  TDVTAVTDAKLQRRYGDNPLEISAIGCTRESEAQRRGKWALLTNSKDRAVTFKVGLDGRI 480

Query: 481  PLPGHIIPVADSLLAGREVGGRISAVAGRVVTLDRDTQARAGDRLIINLPGGRAEGRTVQ 540
            PLPG++IP+AD LLAGR VGGRISAV G+V+ LDRDTQA+ GDRLI+NLP G+ EGRTVQ
Sbjct: 481  PLPGYVIPIADELLAGRPVGGRISAVNGKVIKLDRDTQAKPGDRLILNLPDGKCEGRTVQ 540

Query: 541  SVNGRAVTVTVAYSEPPIAQLQWALDADDLAIPLYRVLRTRRTTEGDFEISALQYEPSKF 600
             V+GR VTVTVAYS  P  +L WALDADDLAIPLYRV+   R   G FEISA+QY+PSKF
Sbjct: 541  LVSGRQVTVTVAYSVAPEPELVWALDADDLAIPLYRVVSVARPEPGVFEISAVQYDPSKF 600

Query: 601  AYIDTGARLEERPISVIPITVVPAPASVTVTSSSVVSQGIAVATMTITWPAVNGAVGYDV 660
             +IDTGARLEERPISV+PITVVPAPASVT+TSS  V+QGIA++TM I+WPAV+GAV YDV
Sbjct: 601  PHIDTGARLEERPISVVPITVVPAPASVTLTSSYAVNQGIAISTMNISWPAVSGAVAYDV 660

Query: 661  EWRKDSGNWIKLQRTGMTSVDVVGIYAGAYLARVRAVSAFDISSSWRAAMLTQLKGKEGL 720
            EWRKDSGNWIKLQRTG TSVDV GIY+GAYLARVR+VSAF+ISS W+ + LT L+GK GL
Sbjct: 661  EWRKDSGNWIKLQRTGATSVDVTGIYSGAYLARVRSVSAFEISSIWKNSDLTNLEGKVGL 720

Query: 721  PLAVSYLNATSQLFGIGLKWGFPAGAEDTQRTEIWYGPSTSLELATKLADLAYPQSDYTM 780
            P AVS+L  TS ++GIG++WGFP GAEDTQR+E+WY  S  L  ATKL+D +YPQS + M
Sbjct: 721  PPAVSFLKTTSLVYGIGIQWGFPPGAEDTQRSELWYSQSPDLTTATKLSDFSYPQSKHEM 780

Query: 781  QELKAGATLFFWARLVDRTGNIGPWYPVGTGVMGQASSDAGPILDMLAGKISKTELGEDL 840
            Q + AGA+ +FWARLVDRTGN+GP+YP+   V G+ASSD        A KI K  L + L
Sbjct: 781  QNILAGASFYFWARLVDRTGNVGPFYPIPGAVNGRASSDQTEYDKYFAEKIGKGALYQSL 840

Query: 841  LGEIEKIPG--------------------LQDQLDALDESYDPAKTYIKNAIVRSGQLLY 880
              EI+ I G                    + + +DAL+  Y P  TY K  +VR GQ L+
Sbjct: 841  REEIDLITGDGPGSVNDRLEKAKQELEDLISEVVDALE--YVPTNTYAKGDMVRVGQKLF 898

Query: 881  QAKGPVPINTPPPNATYWLDVGQSVETANGLAQQVAFNTADITELDGVVTAQATAFQALR 940
            QA   VP+NT PPNA+YW D+G   ET   +A +++ N A I E+DG VTA A   + + 
Sbjct: 899  QATTAVPVNTTPPNASYWFDMGTIAETNAAMALEISKNKAAIEEVDGKVTATAERLEGVY 958

Query: 941  A------SSRDDGGEGDLAGAIDGWNGTAAIASERSVRASETEAIGRELVTFDAKIGANA 994
            A      +  ++G  GD + +   W+  + IA     +++ T+ +       +A +  N 
Sbjct: 959  ALVKSDSAGSEEGSAGDSSSSAGAWSLMSVIAERDFAQSTRTDIV-------EANVRENT 1011

Query: 995  ANITELTEVVATNDSASTKKIDQLNVSVGQNTAAVQQTSSALADTNGKLATLWSVKMETT 1054
            A+IT +   VAT+ +A+ ++I  L   VG N AAVQ  S A A T GK++ + ++K ETT
Sbjct: 1012 ASITTVQNAVATDKAATAEEIKTLKAGVGDNAAAVQIVSKAQATTEGKVSAMTTIKAETT 1071

Query: 1055 AGGQKYAASFGLGLQVDPSGVSSQFVVRADTFMLLNLANGTPVSPFAVTDGQTFIRDAFI 1114
             GG+K  A    GL +   G +S+ +  A  F +++  +G  ++PF V+ GQ FI  A I
Sbjct: 1072 VGGKKVMA----GLSLGSDGDTSEILAFAQRFAIVDEVSGNLITPFVVSGGQVFINQAVI 1127

Query: 1115 QDGTITNAKIGSYISSTNYIP-GQQGWILN-KDGTFEINGSVPGQGRSIQTHRSLRFWDN 1172
                I N  +G  + S      G+    +N K GT  + G   G G S+  +  L  ++ 
Sbjct: 1128 NTAFIQNIILGMTLRSEAVDSLGRPLLEINVKAGTLTLRGEGDG-GSSLLNNDGLAVYE- 1185

Query: 1173 NNMKRLQLGDL 1183
              ++R  +G L
Sbjct: 1186 GTVRRTMIGRL 1196