Pairwise Alignments

Query, 1185 a.a., host specificity protein from Pseudomonas fluorescens FW300-N2E3

Subject, 815 a.a., Phage tail fiber protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  349 bits (895), Expect = e-100
 Identities = 237/726 (32%), Positives = 354/726 (48%), Gaps = 37/726 (5%)

Query: 15  GSSKPKSPVEASDSLRSTNLAKMLIAVGEGEF-DEVPTDYSIFLDNTPIRDASGNYNFPN 73
           G  K  +P EA D L+ST    ++ A+ EG     V    S+ ++NTP+ DA GN N   
Sbjct: 4   GGGKGHTPREAKDDLKSTQQLSVIDALSEGPIVGPVNGLQSVLINNTPVVDADGNSNIHG 63

Query: 74  VKWDWRSGSVDQSYIPGIPAVENETSLNVELRSDSPWVRSITNTQLSAIRMRFAWPALQR 133
           V   ++ G   Q+ + G  A   ET L VE++ D+P  R++ +  +  +R  F    LQ 
Sbjct: 64  VTVVYQVGETPQAPLEGFEASGAETVLGVEVKHDNPVTRTVVSENVDRLRFTFGVQMLQE 123

Query: 134 QDDEGNVVGYRIDYAIDLATDGGAYQQVYPGAVDGKTTTRYERSVRVD-LPDATSGWLIR 192
             D+G+     ++  I     G  +   +   ++GK TT+Y  SV  D LP     + +R
Sbjct: 124 TTDKGDRNPSSVNLLIQFQRSG-IWNTEFDITINGKITTQYLASVVADNLPPRP--FSVR 180

Query: 193 VRRLTPNQNSNKIADTMLIAGITEVIDAKLRYPNTALLYIEFDAEQFTNIPAV-TVRCRA 251
           + R+TP+  ++++ +  L +  TE+ID +  YP TA+  +  DAEQF +         R 
Sbjct: 181 MVRVTPDSTTDRLQNKTLWSSYTEIIDIRQGYPGTAVAGLLVDAEQFGSQQVTRNYHLRG 240

Query: 252 RKWQVPSNYDPMSRTYTGTWDGTMKQAWTNNPAWITYGICTEDRFGLGKRIKSFMVDKWE 311
           R +QVPSNYDP +RTYTG WDG  K A+TNNPAW T    T  R+GLG+RI    VDKW 
Sbjct: 241 RIFQVPSNYDPDTRTYTGLWDGAFKPAYTNNPAWCTMDKLTHPRYGLGRRIGGADVDKWA 300

Query: 312 LYRIAQYCDQLVPNGLGGTEPRFLCDMNLQGKADAWSLLRDIAGIYRGMTYWAQGQLVMQ 371
           LY IAQYCDQ VP+G GGTEPR   +  +  +  A+ +L D   + R M  W   ++   
Sbjct: 301 LYAIAQYCDQPVPDGFGGTEPRMTLNAYITTQRKAYDVLADFCSVMRCMPVWNGRKMTFI 360

Query: 372 ADMPRAQDFDYVFTRANVIDGKFSYGSASAKTRYTRALVSYDNPANNYDTDVIPFADLAL 431
            D P   D  + +T  NV+ G+F Y  ++ K R+    V Y +P N + T      D A 
Sbjct: 361 QDRP--SDKAWTYTNGNVVGGRFKYSFSALKDRHNAVEVRYTDPLNGWQTSTELVEDHAS 418

Query: 432 QRRMGDKPTELSAIGCTRASEAQRRGKWAILSN-NQDRTVSFKAGMEGVIPLPGHIIPVA 490
           Q R G    ++ A GCT   +A R G W +++   + +TV F  G EG+   PG II V 
Sbjct: 419 QARYGRNLLKMDAFGCTSRGQAHRTGLWVMMTELLETQTVDFSVGAEGLRHTPGDIIEVC 478

Query: 491 DSLLAGREVGGRIS--AVAGRVVTLDRDTQARAGDRLIINL--PGGRAEGRTVQSVNGRA 546
           D+  AG  VGGRI+   ++ R +TLDR+          +N+  P G+     +QS     
Sbjct: 479 DNDYAGASVGGRITDLDISTRTLTLDREITLPESGATTLNIVGPDGKPFSTEIQSQPAPD 538

Query: 547 VTVTVAYSEPPIAQLQWALDADDLAIPLYRVLRTRRTTEGDFEISALQYEPSKFAYIDTG 606
             VT    E       W L    L   L+R +R +   +G + I+ALQ+ P K + +D G
Sbjct: 539 RVVTKVLPETVQPYSIWGLKLPSLKRRLFRCVRIKENDDGTYAITALQHVPEKESIVDNG 598

Query: 607 ARLEERPISVIPITVVPAPASVTVTSSSVVSQGIAVATMTITWPAVNGAVGYDVEWRKDS 666
           A  +  P+     +++P PA   +T S+     +  A      P V   V + V     S
Sbjct: 599 AHFD--PLPGTTNSIIP-PAVQHLTVSTDNDSTLYQAKAKWGTPRVVKDVRFVVRLTTGS 655

Query: 667 GNW---IKLQRTGMTSVDVVGIY---AGAYLARVRAVSAFDISSSWRAAMLTQLKGKEGL 720
           GN    ++L  T  TS      +    G Y   VRA++ +               G++G 
Sbjct: 656 GNEGDPVRLVTTATTSETEYAFHELPLGDYTLTVRAINGY---------------GQQGE 700

Query: 721 PLAVSY 726
           P +V++
Sbjct: 701 PASVAF 706