Pairwise Alignments

Query, 547 a.a., long-chain fatty acid--CoA ligase from Pseudomonas fluorescens FW300-N2E3

Subject, 548 a.a., AMP-binding domain protein from Pseudomonas putida KT2440

 Score =  242 bits (618), Expect = 2e-68
 Identities = 176/537 (32%), Positives = 261/537 (48%), Gaps = 31/537 (5%)

Query: 17  PLLIKQLLLSGVRYEPGREIVYADKLRYSYQTLNQRIRRLANALTAAGVKAGDTVALLDW 76
           PL     L    +  P R+ V     RYSY+ L++R R LA+AL   GV+ G+ VA+L  
Sbjct: 19  PLSPLSFLKRAAQVYPQRDAVIYGARRYSYRQLHERSRALASALERVGVQPGERVAILAP 78

Query: 77  DSHRYLECFFAVPMIGAVLHTVNIRLSADQVLFTMNHAEDDLVLVHDDFLPLVEQIQGQL 136
           +    LE  + VP  GAVL  +NIRL    + F + H    +++   +F  +  Q    L
Sbjct: 79  NIPEMLEAHYGVPGAGAVLVCINIRLEGRSIAFILRHCAAKVLICDREFGAVANQALAML 138

Query: 137 STVKGYLQLTDDTATDTSLPVLGEYEQLLSQA--ADQYQFPDFDENSVATLFYTTGTTGD 194
                 + + DD A    L    +YE  L+Q   A     P  +  S+A + YT+GTTGD
Sbjct: 139 DAPPLLVGIDDDQAERADLAHDLDYEAFLAQGDPARPLSAPQNEWQSIA-INYTSGTTGD 197

Query: 195 PKGVYFTHRQLVLHTLNAVGTLGVYQGLPLLRSDDVYMPITPMFHVHAWGVPYVATLMGL 254
           PKGV   HR   L   NA     ++Q    L    VY+   PMFH + W   +  TL G 
Sbjct: 198 PKGVVLHHRGAYL---NACAGALIFQ----LGPRSVYLWTLPMFHCNGWSHTWAVTLSGG 250

Query: 255 KQVYPGRYEPNRLVRLYREESVTFSHCVPTLLQMILGCEEAAQTRFDGWKMLLGGSALTL 314
             V   + +P+ +     E +VT     P ++ M++  E A+        ++ GG+A   
Sbjct: 251 THVCLRKVQPDAINAAIAEHAVTHLSAAPVVMSMLIHAEHASAPPVPV-SVITGGAAPPS 309

Query: 315 GIASEASARGIRVHSGYGMSETC--PLLCTTYLRDEELQLPTQSQLAIRIKTGTPVPMVD 372
            + +   ARG  +   YGM+E+     LC      +EL L  ++Q   R     P+ + +
Sbjct: 310 AVIAAMEARGFNITHAYGMTESYGPSTLCLWQPGVDELPLEARAQFMSRQGVAHPL-LEE 368

Query: 373 LKIVDAN-GNDMPHDGESVGEIVVRAPWLTQGYWKAPEKGAELWRDGWMHTGDIASIDAL 431
             ++D + G  +P DG ++GE+VVR   + +GY   PE       +GW+HTGD+A +   
Sbjct: 369 ATVLDTDTGRPVPADGLTLGELVVRGNTVMKGYLHNPEATRAALANGWLHTGDLAVLHLD 428

Query: 432 GGVEIKDRIKDVIKTGGEWISSLELESLISEHSAVMSVAVVGIADEQWGERPMALV---- 487
           G VEIKDR KD+I +GGE ISSLE+E ++ +H  V+  AVV   D +WGE P A V    
Sbjct: 429 GYVEIKDRAKDIIISGGENISSLEIEEVLYQHPEVVEAAVVARPDSRWGETPHAFVTLRA 488

Query: 488 -VCAPGQYLDRKILEVHLQGFVERGRINKWAIPKQFKFVTEIPKTSVGKINKKLIRE 543
              A G  L R            R R+  +  P+    V ++PKT+ GKI K ++RE
Sbjct: 489 DALASGDDLVRWC----------RERLAHFKAPRHVSLV-DLPKTATGKIQKFVLRE 534