Pairwise Alignments

Query, 547 a.a., long-chain fatty acid--CoA ligase from Pseudomonas fluorescens FW300-N2E3

Subject, 560 a.a., Medium-chain-fatty-acid CoA ligase from Pseudomonas putida KT2440

 Score =  719 bits (1855), Expect = 0.0
 Identities = 344/544 (63%), Positives = 424/544 (77%), Gaps = 1/544 (0%)

Query: 1   MMATKIIPPADGAYAYPLLIKQLLLSGVRYEPGREIVYADKLRYSYQTLNQRIRRLANAL 60
           M+ T+II PA+GAYAYPLLIK+LL+SG RYE  REIVY D++R +Y  LN+RI RLAN L
Sbjct: 1   MLQTRIIKPAEGAYAYPLLIKRLLMSGSRYEKTREIVYRDQMRLTYPQLNERIARLANVL 60

Query: 61  TAAGVKAGDTVALLDWDSHRYLECFFAVPMIGAVLHTVNIRLSADQVLFTMNHAEDDLVL 120
           T AGVKAGDTVA++DWDSHRYLEC FA+PMIGAV+HT+N+RLS +Q+L+TMNHAED +VL
Sbjct: 61  TEAGVKAGDTVAVMDWDSHRYLECMFAIPMIGAVVHTINVRLSPEQILYTMNHAEDRVVL 120

Query: 121 VHDDFLPLVEQIQGQLSTVKGYLQLTDDTATDTSLP-VLGEYEQLLSQAADQYQFPDFDE 179
           V+ DF+ L + I GQL+TV   L LTD       LP ++GEYEQLL+ A+ +Y FPDFDE
Sbjct: 121 VNSDFVGLYQAIAGQLTTVDKTLLLTDGPDKTAELPGLVGEYEQLLAAASPRYDFPDFDE 180

Query: 180 NSVATLFYTTGTTGDPKGVYFTHRQLVLHTLNAVGTLGVYQGLPLLRSDDVYMPITPMFH 239
           NSVAT FYTTGTTG+PKGVYF+HRQLVLHTL      G    + LL S+DVYMPITPMFH
Sbjct: 181 NSVATTFYTTGTTGNPKGVYFSHRQLVLHTLAEASVTGSIDSVRLLGSNDVYMPITPMFH 240

Query: 240 VHAWGVPYVATLMGLKQVYPGRYEPNRLVRLYREESVTFSHCVPTLLQMILGCEEAAQTR 299
           VHAWG+PY AT++G+KQVYPGRYEP+ LV+L+REE VTFSHCVPT+LQM+L C  A    
Sbjct: 241 VHAWGIPYAATMLGMKQVYPGRYEPDMLVKLWREEKVTFSHCVPTILQMLLNCPNAQGQD 300

Query: 300 FDGWKMLLGGSALTLGIASEASARGIRVHSGYGMSETCPLLCTTYLRDEELQLPTQSQLA 359
           F GWK+++GGS+L   +   A ARGI++ + YGMSETCPL+   +L DE        ++ 
Sbjct: 301 FGGWKIIIGGSSLNRSLYQAALARGIQLTAAYGMSETCPLISAAHLNDELQAGSEDERVT 360

Query: 360 IRIKTGTPVPMVDLKIVDANGNDMPHDGESVGEIVVRAPWLTQGYWKAPEKGAELWRDGW 419
            RIK G PVP+V+  IVD  GN +P DGE+ GE+V+RAPWLT GY+K PEK  ELW+ GW
Sbjct: 361 YRIKAGVPVPLVEAAIVDGEGNFLPADGETQGELVLRAPWLTMGYFKEPEKSEELWQGGW 420

Query: 420 MHTGDIASIDALGGVEIKDRIKDVIKTGGEWISSLELESLISEHSAVMSVAVVGIADEQW 479
           +HTGD+A++D +G ++I+DRIKDVIKTGGEW+SSL+LE LIS H AV  VAVVG+AD QW
Sbjct: 421 LHTGDVATLDGMGYIDIRDRIKDVIKTGGEWVSSLDLEDLISRHPAVREVAVVGVADPQW 480

Query: 480 GERPMALVVCAPGQYLDRKILEVHLQGFVERGRINKWAIPKQFKFVTEIPKTSVGKINKK 539
           GERP AL+V   G  +D K L+ HL+ FVE+G INKWAIP Q   VTEIPKTSVGK++KK
Sbjct: 481 GERPFALLVARDGHDIDAKALKEHLKPFVEQGHINKWAIPSQIALVTEIPKTSVGKLDKK 540

Query: 540 LIRE 543
            IR+
Sbjct: 541 RIRQ 544