Pairwise Alignments

Query, 547 a.a., long-chain fatty acid--CoA ligase from Pseudomonas fluorescens FW300-N2E3

Subject, 548 a.a., 3-methylmercaptopropionyl-CoA ligase (DmdB) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  209 bits (533), Expect = 2e-58
 Identities = 160/541 (29%), Positives = 249/541 (46%), Gaps = 20/541 (3%)

Query: 9   PADGAYAYPLLIKQLLLSGVRYEPGREIVYADKLRYSYQTLNQRIRRLANALTAAGVKAG 68
           P  GA   PL     L       P R  V    LR S+     R RR A+AL  AG+   
Sbjct: 10  PRTGANFAPLTPLSFLERAAEVYPDRLAVVHGALRQSWAQTYTRCRRFASALQRAGIGHQ 69

Query: 69  DTVALLDWDSHRYLECFFAVPMIGAVLHTVNIRLSADQVLFTMNHAEDDLVLVHDDFLPL 128
           DTVA++  ++   +E  F +PM GAVL+T+N RL A+ + F ++H E   VLV  +F   
Sbjct: 70  DTVAVMLPNTPPMVEAHFGIPMAGAVLNTLNTRLDAETIAFMLDHGEARAVLVDPEFSGT 129

Query: 129 VEQIQGQLSTVKGYLQL-TDDTATDTSLPVLG--EYEQLLSQAADQYQFPD-FDENSVAT 184
           + +           L + T D   D     LG   YE  L+     +++    DE     
Sbjct: 130 LAKAIALRQRRDHLLVIETQDELFDGPSQSLGGQAYEAFLAGGDPGFEWQQPGDEWDAIA 189

Query: 185 LFYTTGTTGDPKGVYFTHRQLVLHTLNAVGTLGVYQGLPLLRSDDVYMPITPMFHVHAWG 244
           L YT+GTTG+PKGV + HR   ++ ++ V    +   +P      VY+   PMFH + W 
Sbjct: 190 LNYTSGTTGNPKGVVYHHRGAAINAISNV----LEWDMP---KHAVYLWTLPMFHCNGWC 242

Query: 245 VPYVATLMGLKQVYPGRYEPNRLVRLYREESVTFSHCVPTLLQMILGCEEAAQTRFD-GW 303
            P+         V   R +P  +    R   VT     P +  +++    A +     G 
Sbjct: 243 FPWTVAARAGVNVCLRRVDPQAIFDAMRAHGVTHYCGAPIVHGLLVNAPAAMKAGVPAGV 302

Query: 304 KMLLGGSALTLGIASEASARGIRVHSGYGMSETCPLLCTTYLRDEELQLPTQSQLAIRIK 363
           K ++ G+A    +       G  +   YG++E           +   +LP   +  +  +
Sbjct: 303 KAMVAGAAPPAAMIEGMEQMGFDLTHVYGLTEVYGPATVCARHENWSELPIGERARLNAR 362

Query: 364 TGTPVPMV-DLKIVDANG-NDMPHDGESVGEIVVRAPWLTQGYWKAPEKGAELWRDGWMH 421
            G    +  +++++D      +PHDGE++GEI+ R     +GY K P+   E +  GW H
Sbjct: 363 QGVRYHLQREVRVLDPQTLRPVPHDGETMGEIMFRGNIAMKGYLKNPQATQEAFAGGWFH 422

Query: 422 TGDIASIDALGGVEIKDRIKDVIKTGGEWISSLELESLISEHSAVMSVAVVGIADEQWGE 481
           +GD+A     G ++IKDR KD+I +GGE ISS+E+E ++  H  V++ AVV   D +WGE
Sbjct: 423 SGDLAVQYPDGYIKIKDRSKDIIISGGENISSIEVEDVLYRHPEVLAAAVVAKPDARWGE 482

Query: 482 RPMALVVCAPGQYLDRKILEVHLQGFVERGRINKWAIPKQFKFVTEIPKTSVGKINKKLI 541
            P A V    G     + +  H      +  +  + +P+   F  E+PKTS GKI K  +
Sbjct: 483 TPCAFVELKAGATATAQDIVAHC-----KQHLAGFKVPRAVVF-GELPKTSTGKIQKFEL 536

Query: 542 R 542
           R
Sbjct: 537 R 537