Pairwise Alignments

Query, 547 a.a., long-chain fatty acid--CoA ligase from Pseudomonas fluorescens FW300-N2E3

Subject, 547 a.a., 3-methylmercaptopropionyl-CoA ligase (DmdB) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  361 bits (926), Expect = e-104
 Identities = 215/543 (39%), Positives = 308/543 (56%), Gaps = 30/543 (5%)

Query: 17  PLLIKQLLLSGVRYEPGREIVY----ADKLRYSYQTLNQRIRRLANALTAAGVKAGDTVA 72
           PLLI  L++   R+    EIV      D  R ++  +  R R++ANAL   G+  GD VA
Sbjct: 9   PLLISSLIVHAERHHASGEIVSRRVEGDIHRSTWGQIASRSRQVANALDGLGLPQGDRVA 68

Query: 73  LLDWDSHRYLECFFAVPMIGAVLHTVNIRLSADQVLFTMNHAEDDLVLVHDDFLPLVEQI 132
            L W+ +R+LE +F V   G VLHT+N RL  +Q+++ +NHAED  V     FLPLV+ +
Sbjct: 69  TLAWNGYRHLELYFGVSGTGRVLHTLNPRLHPEQLVWIVNHAEDKAVCFDMTFLPLVKAV 128

Query: 133 QGQLSTVKGYLQL--TDDTATDTSLPVLGEYEQLLSQAADQYQFPDFDENSVATLFYTTG 190
             +  TVK ++ L   D    D+ +P L  YE  + Q    Y +P FDENS +++ YT+G
Sbjct: 129 AAKCPTVKHWIALCDADKLPADSGIPGLQSYEAWMGQQPTTYAWPTFDENSASSMCYTSG 188

Query: 191 TTGDPKGVYFTHRQLVLHTLNAVGTLGVYQGLP---LLRSDDVYMPITPMFHVHAWGVPY 247
           TTG+PK   ++HR  +LH   A         LP    L + D  +P+ PMFHV+AWG+PY
Sbjct: 189 TTGNPKAALYSHRSTLLHAFGAA--------LPDAMCLSARDSVLPVVPMFHVNAWGLPY 240

Query: 248 VATLMGLKQVYPGRYEPNRLV-RLYREESVTFSHCVPTLLQMILGCEEAAQTRFDGW-KM 305
            A  +G K V+PG     + V  L   E VT +  VPT+ QM+LG  +A   +F    + 
Sbjct: 241 AAAAVGCKLVFPGAALDGKSVYELIEAEKVTMAAGVPTVWQMLLGHLQANNLKFSTLNRT 300

Query: 306 LLGGSALTLGIASEAS-ARGIRVHSGYGMSETCPLLCTTYLRDEELQLPTQSQLAIRIKT 364
           ++GGSA    + S  +   G+ V   +GM+E  PL     L++ +L LP   QL +R+K 
Sbjct: 301 VIGGSACPPAMISAFNDVYGVEVLHAWGMTEMSPLGTVCTLKNAQLALPPAEQLKVRLKQ 360

Query: 365 GTPVPMVDLKIVDANGNDMPHDGESVGEIVVRAPWLTQGYWKAPEKGAELWRD----GWM 420
           G  +   D+KIV+  G ++P DG++ G+++VR PW+   Y+K  E G  L  D    GW 
Sbjct: 361 GRAIFGADMKIVNEAGEELPWDGKAYGDLLVRGPWIIASYFKG-EGGDPLRYDAQGHGWF 419

Query: 421 HTGDIASIDALGGVEIKDRIKDVIKTGGEWISSLELESLISEHSAVMSVAVVGIADEQWG 480
            TGD+A+IDA G ++I DR KDVIK+GGEWISS+++E++   H AV   A VG+   +W 
Sbjct: 420 PTGDVATIDADGFMQITDRSKDVIKSGGEWISSIDVENIAMAHPAVAMAACVGMRHPKWD 479

Query: 481 ERPMALVVCAPGQYLDRKILEVHLQGFVERGRINKWAIPKQFKFVTEIPKTSVGKINKKL 540
           ERP+ +VV  PG  L R+     L  F E G+I KW IP    FV  IP  + GK+ K  
Sbjct: 480 ERPIVVVVKKPGTELSRE----ELLAFYE-GKIAKWQIPDDVVFVDAIPLGATGKMQKMT 534

Query: 541 IRE 543
           +RE
Sbjct: 535 LRE 537