Pairwise Alignments

Query, 547 a.a., long-chain fatty acid--CoA ligase from Pseudomonas fluorescens FW300-N2E3

Subject, 545 a.a., Medium-chain-fatty-acid--CoA ligase (EC 6.2.1.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  356 bits (913), Expect = e-102
 Identities = 209/540 (38%), Positives = 312/540 (57%), Gaps = 26/540 (4%)

Query: 17  PLLIKQLLLSGVRYEPGREIVY----ADKLRYSYQTLNQRIRRLANALTAAGVKAGDTVA 72
           PLLI  L+     + P  EIV         R  +  + QR R++ANAL A GV+ G+ V 
Sbjct: 9   PLLISSLIEHAATFHPHTEIVSRLPEGTVHRTDWLGVRQRARQVANALQALGVQPGERVG 68

Query: 73  LLDWDSHRYLECFFAVPMIGAVLHTVNIRLSADQVLFTMNHAEDDLVLVHDDFLPLVEQI 132
            L W+S+R+L  ++ V   GAVLHTVN RL  +Q+ + +NHAED ++     F PLVEQ+
Sbjct: 69  TLAWNSYRHLALYYGVSGSGAVLHTVNPRLFPEQIDYIVNHAEDKVLCFDISFAPLVEQL 128

Query: 133 QGQLSTVKGYLQLTDDTATDT-SLPVLGEYEQLLSQAADQYQFPDFDENSVATLFYTTGT 191
             +L +VK ++ +TD        +P L  +++LL   +  Y +P+ DE S ++L YT+GT
Sbjct: 129 APRLKSVKAFVAMTDRAHMPAIQVPNLLCFDELLDAQSSDYTWPELDEKSASSLCYTSGT 188

Query: 192 TGDPKGVYFTHRQLVLHTLN--AVGTLGVYQGLPLLRSDDVYMPITPMFHVHAWGVPYVA 249
           TG+PKGV ++HR  +LHTL   A  T G+        S +  M I PMFH +AWG PY A
Sbjct: 189 TGNPKGVLYSHRSTLLHTLMELAPDTFGI-------SSAETLMLIVPMFHANAWGAPYAA 241

Query: 250 TLMGLKQVYPGRY-EPNRLVRLYREESVTFSHCVPTLLQMI---LGCEEAAQTRFDGWKM 305
            ++G + V PG + +   +  L R+E VTFS  VPT+  M+   L        R  G K 
Sbjct: 242 AMVGARLVLPGPHLDGESVYTLMRDEKVTFSQGVPTVWMMLFQYLDKNPQIDPRQLGVKR 301

Query: 306 L-LGGSALTLGIASEASAR-GIRVHSGYGMSETCPLLCTTYLRDEELQLPTQSQLAIRIK 363
           + +GG+A++  +      + G  V  G+GM+ET P+   + L  +   +     + +++K
Sbjct: 302 IGIGGAAVSRAVLERFEKQFGAEVVQGWGMTETSPIGVISKLLPKHEGMAPDELVKVKLK 361

Query: 364 TGTPVPMVDLKIVDANGNDMPHDGESVGEIVVRAPWLTQGYWKAPEKGAELWRDGWMHTG 423
            G  V  VDLKIVDA+G  +P DG + G ++VR PW+  GY++  E G+ L  +G+  TG
Sbjct: 362 QGRGVWGVDLKIVDADGRALPWDGVAYGNLMVRGPWIASGYYRG-EGGSVLDEEGFFPTG 420

Query: 424 DIASIDALGGVEIKDRIKDVIKTGGEWISSLELESLISEHSAVMSVAVVGIADEQWGERP 483
           D+A+IDA G +++ DR KDVIK+GGEWISS+++E+  + H  V   AV+G+A  +W ERP
Sbjct: 421 DVATIDADGYLQLVDRAKDVIKSGGEWISSIDVENAAASHPGVAEAAVIGVAHPKWQERP 480

Query: 484 MALVVCAPGQYLDRKILEVHLQGFVERGRINKWAIPKQFKFVTEIPKTSVGKINKKLIRE 543
           + LVV  PG  +DR+ +  HL       R+ KW +P    FV  +P T+ GK+ K  +RE
Sbjct: 481 LLLVVKRPGAEVDREAVLAHL-----ATRVAKWWLPDDVLFVESLPHTATGKLLKTKLRE 535