Pairwise Alignments

Query, 547 a.a., long-chain fatty acid--CoA ligase from Pseudomonas fluorescens FW300-N2E3

Subject, 555 a.a., Medium-chain-fatty-acid--CoA ligase (EC 6.2.1.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  354 bits (909), Expect = e-102
 Identities = 206/533 (38%), Positives = 295/533 (55%), Gaps = 25/533 (4%)

Query: 23  LLLSGVRYEPGREIVYADKL----RYSYQTLNQRIRRLANALTAAGVKAGDTVALLDWDS 78
           L+    R    +EIVY        RY+Y     R+ R ANAL A GV+ GD V +LDW+S
Sbjct: 26  LIRHAARTHGDQEIVYRTPDGGWDRYTYAECYARVCRSANALRALGVEPGDRVGILDWNS 85

Query: 79  HRYLECFFAVPMIGAVLHTVNIRLSADQVLFTMNHAEDDLVLVHDDFLPLVEQIQGQLST 138
            R+ E ++++P +GAV+  +N+RL A+ + + + H++   V V +  LP+ E +      
Sbjct: 86  RRHFELYWSIPGLGAVMLQMNLRLGAEDLGYVVGHSKVSYVCVDESLLPIAESVAANSPQ 145

Query: 139 VKGYLQLTDDTATD--TSLPVLGEYEQLLSQAADQYQFPDFDENSVATLFYTTGTTGDPK 196
           +KG++ +TD       T+L  L  YE L++ A  +  +P+ DE S  +  YTTGTTG PK
Sbjct: 146 IKGWIVMTDKPLDQIKTTLKPLLHYEDLMAAADTKIDWPEIDETSAYSACYTTGTTGKPK 205

Query: 197 GVYFTHRQLVLHTLNAVGTLGVYQGLPLLRSDDVYMPITPMFHVHAWGVPYVATLMGLKQ 256
           GVY++HR + LH+      LG       +  DD  M ITPMFH   WG+P  ATL+  K 
Sbjct: 206 GVYYSHRGIYLHSTAMATNLG-------MTLDDCVMLITPMFHGQCWGLPQAATLLADKI 258

Query: 257 VYPGRY---EPNRLVRLYREESVTFSHCVPTLLQMILGCEEAAQTR--FDGWKMLLGGSA 311
           V PGRY   +   LV     E VT ++  P + Q +L   E    +  F   +ML G S 
Sbjct: 259 VLPGRYAAEDTKPLVDAMIAEGVTITNGAPAIFQPMLQYIETMPVKPDFGRMRMLSGASE 318

Query: 312 LTLGIA-SEASARGIRVHSGYGMSETCPLLCTTYLRDEELQLPTQSQL-AIRIKTGTPVP 369
             L +        G  V   YG +E   L+    L+    +  TQ +   ++ K G  + 
Sbjct: 319 PPLSMMIGFYDLTGAEVVHAYGATEATTLVTVNRLKPTLSKRLTQDERWNLKRKQGLVLT 378

Query: 370 MVDLKIVDANGNDMPHDGESVGEIVVRAPWLTQGYWKAPEKGAELWRDGWMHTGDIASID 429
            VD++I++AN  D+PHDG+S GEI +R PW+T  Y   P+ G      GW  +GD+ ++D
Sbjct: 379 GVDIRILNANDQDLPHDGQSAGEICLRGPWITTSYHDMPDSGDRFLEGGWWRSGDVGTVD 438

Query: 430 ALGGVEIKDRIKDVIKTGGEWISSLELESLISEHSAVMSVAVVGIADEQWGERPMALVVC 489
             G +++ DRIKDVIK+GGEWISS+++E+L+  HSAV   AVVGI   +W ERP+ALVV 
Sbjct: 439 ENGYLKVTDRIKDVIKSGGEWISSIDMENLLMGHSAVRDAAVVGIPHAKWQERPLALVVL 498

Query: 490 APGQYLDRKILEVHLQGFVERGRINKWAIPKQFKFVTEIPKTSVGKINKKLIR 542
            PGQ   ++ L+ HL          KW +P Q  FV  IPKTSVGK++KK IR
Sbjct: 499 KPGQQATQEQLQEHL-----TSAFAKWQLPDQVLFVEAIPKTSVGKLDKKRIR 546