Pairwise Alignments

Query, 1096 a.a., histidine kinase from Pseudomonas fluorescens FW300-N2E3

Subject, 1283 a.a., diguanylate phosphodiesterase from Pseudomonas simiae WCS417

 Score =  424 bits (1089), Expect = e-122
 Identities = 276/737 (37%), Positives = 402/737 (54%), Gaps = 48/737 (6%)

Query: 383  LYRDESGVPLRMAGTLLDITDQVEREQRLITSEEKFASLFQVSPDPICVTRQDTGQFIEI 442
            L RD++    R+ G   DITDQ+E  + L  SE+++  L +   D IC T         I
Sbjct: 554  LARDKTTQISRIIGVAKDITDQIEASESLRDSEQRYRMLAESISDVICSTDSQLA-LNYI 612

Query: 443  NPAFTQIFGWTTTDVIDRSADEIGLWDASVKRQQRI-------EQVIRE----QALNNVA 491
            +P+   + G+    V          W + +   Q++       E+V R     +ALN + 
Sbjct: 613  SPSVNAVLGYDVDWVFKNG------WQSIIANPQQLTGIYSLMEEVSRALGDPEALNKLR 666

Query: 492  IIVHHK---------DGQPLTCVISSRQISVGNE----PCIVTTLRDITQQQRSEAALKA 538
              +  +         DG+ +   I  R + V +E      I+   RDI+QQ+R+E  L+ 
Sbjct: 667  DEIQTQLFLFDCLRADGRKVP--IELRMVLVWDEHGAFEGILGVGRDISQQRRAEKDLRM 724

Query: 539  SEEKFAKAFHSSPDAITITERDSGRYLEVNDGFCRLTGYSADEVVGKTVYQIGIWAEEKQ 598
            +    A  F  S  AI IT+  +G  ++ N+ F R++GY+  +V+ +    + +  +E+Q
Sbjct: 725  A----ATVFEHSTSAILITD-PAGYIVQANEAFSRVSGYAVSDVLDQLPNMLTV--DEQQ 777

Query: 599  RSTLLAALKA--KGRVHHQEMLGRNKRGEILTVEVSIEPITLNE--TACLLMTARDVSLL 654
             + L   LK   +      E+  + + GE     V I  +  +E   A  +    D+S  
Sbjct: 778  EAHLRYVLKQLHQHSTWEGEVWLKRRNGEHYPAWVGITAVFDDEGDLASYVCFFSDISER 837

Query: 655  KNAEAQIRHLAYHDPLTNLPNRALLMDRLSQQIALLKRHNLRGALLFLDLDHFKHINDSL 714
            K +E +I  LAY+D LT+LPNR L  DRL   +   +R      L+FLDLD FK INDSL
Sbjct: 838  KASEQRIHRLAYYDALTHLPNRTLFQDRLHTALQAAERQKSWVVLMFLDLDRFKPINDSL 897

Query: 715  GHPVGDTVLKIITARLEASVRMEDTVARLGGDEFVVLLSGLEGTRNEVSEQVRELADTLR 774
            GH  GD +LK +  RL   V  +DTVAR+GGDEF +LL         ++  +  +A+ + 
Sbjct: 898  GHAAGDRMLKEMATRLLGCVAEDDTVARMGGDEFTLLLQPRVNREMALNRAIH-VAEQIL 956

Query: 775  ELLSEPMFLDGQRLQVTPSIGVALIPDHGSTPTDLLKRADIALYRAKDSGRNATQMFHNT 834
              L +P  L+G+   VT SIG+AL P  G+  + L+K AD A+Y AK+ G+N  Q +   
Sbjct: 957  ASLVKPFVLEGREFFVTASIGIALSPQDGNELSQLMKNADTAMYHAKERGKNNFQFYQAD 1016

Query: 835  MQKAASERLRMETDLRLALSRGEFSVQYQPQVDALDGRIIGAEALVRWRHPRLGEQSPSE 894
            M  +A ERL +E+DLR AL + EF + YQPQ      R+ GAEAL+RWRHPR G   P +
Sbjct: 1017 MNASALERLELESDLRHALEQNEFVLYYQPQFSGDGKRLTGAEALLRWRHPRRGLVPPGD 1076

Query: 895  FIKVLEDSGLILEVGAWILDETCQAFRQLIDRGLIDPLNFSLCVNISPRQFRQNDFVERI 954
            FI VLE+ GL+++VG W++ E C+  +      +  P    + VNIS RQF       RI
Sbjct: 1077 FIPVLEELGLVVDVGDWVISEACRQLKTWHQNKVRVP---KVSVNISARQFSDGQLGTRI 1133

Query: 955  EQTLSSHGLPYSLLKLEVTEGIVIQNLDDTISKMRRLKKLGVSFAMDDFGTGYSSLTYLK 1014
               L   GLP + L+LE+TE I+++ +++ +  +  LK LG+S A+DDFGTGYSSL YLK
Sbjct: 1134 ATILKDTGLPPACLELELTESILMREVNEAMQILDSLKNLGLSIAVDDFGTGYSSLNYLK 1193

Query: 1015 RLPVDTLKIDQSFIRDATSDPNDAEIIRAIVAMARSLELTVIAEGVETTEQLDFLQGLGC 1074
            + P+D LKID++F+    S   DA+I RAI+AMA SL L VIAEGVET EQLDFL+  GC
Sbjct: 1194 QFPIDVLKIDRTFVDGLPSGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLDFLREHGC 1253

Query: 1075 HLYQGYLHSQPLPLEGF 1091
               QGYL  +P+P   F
Sbjct: 1254 DEVQGYLFGRPMPANRF 1270



 Score = 28.1 bits (61), Expect = 0.004
 Identities = 13/40 (32%), Positives = 24/40 (60%)

Query: 139 RMIGVIREITHQRQREQALSSSEKRFATLFHLCPNMVLLT 178
           R+IGV ++IT Q +  ++L  SE+R+  L     +++  T
Sbjct: 564 RIIGVAKDITDQIEASESLRDSEQRYRMLAESISDVICST 603