Pairwise Alignments

Query, 1096 a.a., histidine kinase from Pseudomonas fluorescens FW300-N2E3

Subject, 1098 a.a., PAS/PAC/GAF sensor-containing diguanylate cyclase/phosphodiesterase from Pseudomonas putida KT2440

 Score = 1741 bits (4509), Expect = 0.0
 Identities = 861/1095 (78%), Positives = 975/1095 (89%), Gaps = 4/1095 (0%)

Query: 1    MPKSADRTRSRTPPMPRIQALDPRTSEQSWESAPQLLAALNGARLGAWYWDIERGLISWS 60
            MPKSA+R       +PRI A DP+ SEQ+W++APQLLAALNGA LGAW WDIE G +SWS
Sbjct: 1    MPKSANRFLR----LPRIPAADPQESEQAWQNAPQLLAALNGAHLGAWLWDIESGRVSWS 56

Query: 61   RGTQALFGFDPKKPLPADLEYLDLLPVEDRAKTLRAFNAVVAGAPLEQAMHHRIRWPDGS 120
            RGTQALFGFDP++PLPAD++YLDLLP EDRA+T + F AVV G P+EQAM HRIRWPDGS
Sbjct: 57   RGTQALFGFDPQRPLPADIDYLDLLPEEDRARTRQVFQAVVNGEPVEQAMRHRIRWPDGS 116

Query: 121  LHWLEINGSLIPDKQGRPRMIGVIREITHQRQREQALSSSEKRFATLFHLCPNMVLLTRQ 180
            LHWLEINGSL  D  GRP+MIGVIREIT QR+RE AL +SEKRFATLFHL PN +LLTR+
Sbjct: 117  LHWLEINGSLTHDPHGRPQMIGVIREITRQRERETALINSEKRFATLFHLSPNAILLTRR 176

Query: 181  EDGLISEANQYFESLFGWPVHSVIGRTTLELGLWVNPEQRAKLVKATKAKGELVSMEVQF 240
             DG+I E NQ+FE +FGWP   VIG+T+LELGLWVNPEQR ++V++T+A G  + MEVQF
Sbjct: 177  RDGMIFEVNQHFEDMFGWPGSQVIGKTSLELGLWVNPEQRHQIVESTRANGGPLIMEVQF 236

Query: 241  RASNGQVHDGILSAQKVELEGQPYLLSTFLDTSERKLAEQALKDSQERLDLALDSAQLGT 300
            RA++G+VHDGIL  Q +ELEG  +L+STF+DT+ERK AEQALKDSQERLDLALDSAQLGT
Sbjct: 237  RATSGKVHDGILCTQGIELEGVTFLISTFVDTTERKRAEQALKDSQERLDLALDSAQLGT 296

Query: 301  WDWHIPSGMLYGSARAAQLHGLDPIPFHEPFDAFFEGVPDDERDSMRDAYRSLREGPAGN 360
            WDWHIPSGMLYGSARAAQLHGL PIPFHE FDAFFEGVP+ ER+SMR AYRSLREGPAGN
Sbjct: 297  WDWHIPSGMLYGSARAAQLHGLPPIPFHESFDAFFEGVPEHERNSMRQAYRSLREGPAGN 356

Query: 361  YQLTYRVQLPDGSSRYLESRARLYRDESGVPLRMAGTLLDITDQVEREQRLITSEEKFAS 420
            YQ+TYRVQL +G+SRY+ESRARLYRD+ G+PLRMAGTLLDITDQVEREQRL  SEEKFAS
Sbjct: 357  YQITYRVQLENGTSRYIESRARLYRDDQGIPLRMAGTLLDITDQVEREQRLSASEEKFAS 416

Query: 421  LFQVSPDPICVTRQDTGQFIEINPAFTQIFGWTTTDVIDRSADEIGLWDASVKRQQRIEQ 480
            LFQVSPDPICVTRQDTGQFIEINPAFTQ FGW++  V+ R+A+EIGLW  SV+R +RIEQ
Sbjct: 417  LFQVSPDPICVTRQDTGQFIEINPAFTQTFGWSSAQVLGRTAEEIGLWAESVERAKRIEQ 476

Query: 481  VIREQALNNVAIIVHHKDGQPLTCVISSRQISVGNEPCIVTTLRDITQQQRSEAALKASE 540
            VIREQAL+NVA++++H++G PLTCVISSR I+V ++PC VTTLRDITQQQR+EAALK+SE
Sbjct: 477  VIREQALSNVAVVLNHRNGDPLTCVISSRLITVDDQPCSVTTLRDITQQQRAEAALKSSE 536

Query: 541  EKFAKAFHSSPDAITITERDSGRYLEVNDGFCRLTGYSADEVVGKTVYQIGIWAEEKQRS 600
            EKFAKAFHSSPDAITITER SGRYLEVNDGFCRLTGYS DEV+G TVY+IGIWA++KQRS
Sbjct: 537  EKFAKAFHSSPDAITITERHSGRYLEVNDGFCRLTGYSTDEVIGHTVYEIGIWADDKQRS 596

Query: 601  TLLAALKAKGRVHHQEMLGRNKRGEILTVEVSIEPITLNETACLLMTARDVSLLKNAEAQ 660
             LLA L+ +GRVHH+EMLGRNKRG+ILTVEVS+EPITLNE  CLL+TARDVS LKNA+AQ
Sbjct: 597  ALLAELRERGRVHHREMLGRNKRGDILTVEVSVEPITLNEVDCLLLTARDVSQLKNAQAQ 656

Query: 661  IRHLAYHDPLTNLPNRALLMDRLSQQIALLKRHNLRGALLFLDLDHFKHINDSLGHPVGD 720
            IRHLAYHDPLTNLPNRALLMDRLSQQIALLKRHNLRGALLFLDLDHFKHINDSLGHPVGD
Sbjct: 657  IRHLAYHDPLTNLPNRALLMDRLSQQIALLKRHNLRGALLFLDLDHFKHINDSLGHPVGD 716

Query: 721  TVLKIITARLEASVRMEDTVARLGGDEFVVLLSGLEGTRNEVSEQVRELADTLRELLSEP 780
            TVLKIITARLEASVR+EDTVARLGGDEFVVLLSGLEG+R  V E+VRELADTLRELL+EP
Sbjct: 717  TVLKIITARLEASVRLEDTVARLGGDEFVVLLSGLEGSREHVEEKVRELADTLRELLAEP 776

Query: 781  MFLDGQRLQVTPSIGVALIPDHGSTPTDLLKRADIALYRAKDSGRNATQMFHNTMQKAAS 840
            M LDGQRLQVTPSIGVALIPDHG+TP DLLKRADIALYRAKDSGRN TQ+FH TMQKAAS
Sbjct: 777  MSLDGQRLQVTPSIGVALIPDHGTTPADLLKRADIALYRAKDSGRNTTQLFHTTMQKAAS 836

Query: 841  ERLRMETDLRLALSRGEFSVQYQPQVDALDGRIIGAEALVRWRHPRLGEQSPSEFIKVLE 900
            ERLRME DLRLAL+RGE ++ +QPQVDA D RI+GAE L+RW HP+LG+Q PS+FI+VLE
Sbjct: 837  ERLRMENDLRLALARGELALHFQPQVDARDNRIVGAEVLLRWHHPQLGQQPPSQFIQVLE 896

Query: 901  DSGLILEVGAWILDETCQAFRQLIDRGLIDPLNFSLCVNISPRQFRQNDFVERIEQTLSS 960
            +SGLILEVG+WILDE C A  +++  GLID  +F+LCVNISPRQFRQNDFV R+ ++L  
Sbjct: 897  ESGLILEVGSWILDEACDACARMLTDGLIDADDFNLCVNISPRQFRQNDFVGRVLRSLDD 956

Query: 961  HGLPYSLLKLEVTEGIVIQNLDDTISKMRRLKKLGVSFAMDDFGTGYSSLTYLKRLPVDT 1020
            + LP  +L LE+TEGIVIQNL+DTISKM  LK+ GVSFAMDDFGTGYSSLTYLKRLPVD 
Sbjct: 957  YRLPRQMLTLEITEGIVIQNLEDTISKMCELKRYGVSFAMDDFGTGYSSLTYLKRLPVDA 1016

Query: 1021 LKIDQSFIRDATSDPNDAEIIRAIVAMARSLELTVIAEGVETTEQLDFLQGLGCHLYQGY 1080
            LKIDQSF+RDA  DPNDAEI+RAIVAMARSL+L VIAEGVE TEQL FL+ LGCHLYQGY
Sbjct: 1017 LKIDQSFVRDAPVDPNDAEIVRAIVAMARSLDLAVIAEGVELTEQLAFLERLGCHLYQGY 1076

Query: 1081 LHSQPLPLEGFLKLL 1095
            LHS+PLPL  F ++L
Sbjct: 1077 LHSRPLPLPEFRQML 1091