Pairwise Alignments

Query, 1096 a.a., histidine kinase from Pseudomonas fluorescens FW300-N2E3

Subject, 1247 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  484 bits (1245), Expect = e-140
 Identities = 333/974 (34%), Positives = 503/974 (51%), Gaps = 71/974 (7%)

Query: 146  EITHQRQREQALSSSEKRFATLFHLCPNMVLLTRQEDGLISEANQYFESLFGWPVHSVIG 205
            EI+ +   EQ L SSE  +  L      +       D   S  + + E L G+P+     
Sbjct: 295  EISRRIALEQELRSSEYHYRGLVESLSAIAWEADANDFTYSYVSPHAEDLLGYPLSD--- 351

Query: 206  RTTLELGLW---VNPEQRA---KLVKATKAKGELVSMEVQFRASNGQVHDGILSAQKVEL 259
               L  G W   ++PE          +  A G   S++ +   ++GQ          +E 
Sbjct: 352  --WLRPGFWRSILHPEDALWAQAYCDSETAAGRDHSLDYRVIRADGQPLWVRNIVSMIEH 409

Query: 260  EGQPYLLSTFLDTSERKLAEQALKDSQERLDLALDSAQLGTWDWHIPSGMLYGSARAAQL 319
              QP +    +D SE K  E AL+ S+++                 P  +L        L
Sbjct: 410  GHQPVMRGLMIDISETKRTEDALRLSEQKFASVFQQC---------PDILLIARHSDGCL 460

Query: 320  HGLDPIPFHEPFDAFFEGVPDDERDSMRDAYRSLREGPAGNYQLTYRVQLPDGSSRYLES 379
                 +  +E F+    G+P D+    R A      G  G+  L    +L  G  R LE 
Sbjct: 461  -----LEVNEAFEEQI-GLPPDQVIG-RTATDLDLWGVEGSGPLLLE-RLHQGGIRNLEM 512

Query: 380  RARLYRDESGVPLRMAGT------------LLDITDQVEREQRLITSEEKFASLFQVSPD 427
              R    +    L  A T            + DI+   E +Q+L TSEEKFA  F  SPD
Sbjct: 513  SFRRSNGQLFTGLTSAETFELDGTPALVVAVRDISQLKETQQQLQTSEEKFAKAFHASPD 572

Query: 428  PICVTRQDTGQFIEINPAFTQIFGWTTTDVIDRSADEIGLWDASVKRQQRIEQVIREQAL 487
             + ++RQ  G  +E+N  F ++ G+     ID+++ ++G+W    +R++ ++Q+ R+  +
Sbjct: 573  GLLLSRQSDGLLLEVNEGFCRLTGYDLNPTIDQTSLDLGIWVDLNERKRLVDQLNRDGFV 632

Query: 488  NNVAIIVHHKDGQPLTCVISSRQISVGNEPCIVTTLRDITQQQRSEAALKASEEKFAKAF 547
             +    +   DGQ   C +S+R + +    C++T  RDIT++   +  L+ +    A  F
Sbjct: 633  RDFTCHIRRSDGQIRLCELSARPLPITGVDCMLTIARDITERHLMQEKLQLA----ATVF 688

Query: 548  HSSPDAITITERDSGRYLEVNDGFCRLTGYSADEVVGKTVYQIGIWAEEKQRSTLLAA-- 605
             ++ + + IT+ D  R   VN  F  +TGYS  E +G+T   +   A  +  S    A  
Sbjct: 689  ENTAEGVLITDIDQ-RISAVNRAFSEITGYSEIEALGQTPRLL---ASGQHDSAFYLAMW 744

Query: 606  --LKAKGRVHHQ-EMLGRNKRGEILTVEVSIEPITLNETACLLMTA--RDVSLLKNAEAQ 660
              L A+G  H Q E+  + K GE+    ++I  +  ++       A   D+S +K+A+A+
Sbjct: 745  HQLTAEG--HWQGEIYNKRKNGELYPSWLTISAVRNSDREITHFVAVFADISSIKHAQAK 802

Query: 661  IRHLAYHDPLTNLPNRALLMDRLSQQIALLKRHNLRGALLFLDLDHFKHINDSLGHPVGD 720
            + + A+HDPLT LPNR L  +RL   +   +  N +GA+LFLDLD FKHINDSLGHPVGD
Sbjct: 803  LDYQAHHDPLTGLPNRTLFENRLQGVLTCAQVSNRQGAVLFLDLDRFKHINDSLGHPVGD 862

Query: 721  TVLKIITARLEASVRMEDTVARLGGDEFVVLLSGLEGTRNEVSEQVRELADTLRELLSEP 780
             +LK I  RL+  VR  DTVARLGGDEF++LL GL    +  +     +A+ L    + P
Sbjct: 863  LLLKGIAQRLKEQVRDVDTVARLGGDEFIILLPGLHKPSDAST-----IANKLLACFNAP 917

Query: 781  MFLDGQRLQVTPSIGVALIPDHGSTPTDLLKRADIALYRAKDSGRNATQMFHNTMQKAAS 840
                      + SIG++L P  G+  + L++ AD A+YR+K  GRN  + +   +   AS
Sbjct: 918  FQAGEHEFFTSASIGISLYPQDGTDVSTLIRNADAAMYRSKAKGRNRVEAYTRDLTAQAS 977

Query: 841  ERLRMETDLRLALSRGEFSVQYQPQVDALDGRIIGAEALVRWRHPRLGEQSPSEFIKVLE 900
            ER+ +E +LR A+ R E S+ +QP++      ++GAEAL+RW HP  GE  P  FI + E
Sbjct: 978  ERIALEHELRRAVERNEMSLCFQPKLSLKTQSLVGAEALIRWSHPTFGEVPPEHFIHLAE 1037

Query: 901  DSGLILEVGAWILDETC---QAFRQLIDRGLIDPLNFSLCVNISPRQFRQNDFVERIEQT 957
            ++G IL++G W+L++ C   QA++Q        PL+    +N++  Q R      RIEQ 
Sbjct: 1038 ENGTILQLGDWVLEQACRQMQAWKQHYQP--FGPLS----INLAGAQLRHPHLARRIEQL 1091

Query: 958  LSSHGLPYSLLKLEVTEGIVIQNLDDTISKMRRLKKLGVSFAMDDFGTGYSSLTYLKRLP 1017
            L  H L    L+LE+TE  ++   ++ ++ + +LKKLGV  A+DDFGTGYSSL+YLKRLP
Sbjct: 1092 LKHHQLKAGDLQLEITENFIMSQAEEALAVLYQLKKLGVQLAIDDFGTGYSSLSYLKRLP 1151

Query: 1018 VDTLKIDQSFIRDATSDPNDAEIIRAIVAMARSLELTVIAEGVETTEQLDFLQGLGCHLY 1077
            +D LKID+SFIR    DP+DA I RAI+A+ RS++LT+IAEGVE   Q  FL   GC   
Sbjct: 1152 LDILKIDKSFIRGLPDDPHDAAIARAIIALGRSMQLTIIAEGVENQAQQRFLAAEGCEQI 1211

Query: 1078 QGYLHSQPLPLEGF 1091
            QGY+ S PLP E F
Sbjct: 1212 QGYIVSLPLPPEEF 1225



 Score =  121 bits (303), Expect = 4e-31
 Identities = 95/356 (26%), Positives = 175/356 (49%), Gaps = 13/356 (3%)

Query: 107 EQAMHHRIRWPDGSLHWLEINGSLIPDKQGRPRMIGVIREITHQRQREQALSSSEKRFAT 166
           + ++ +R+   DG   W+    S+I +   +P M G++ +I+  ++ E AL  SE++FA+
Sbjct: 383 DHSLDYRVIRADGQPLWVRNIVSMI-EHGHQPVMRGLMIDISETKRTEDALRLSEQKFAS 441

Query: 167 LFHLCPNMVLLTRQEDGLISEANQYFESLFGWPVHSVIGRTTLELGLWVNPEQRAKLVKA 226
           +F  CP+++L+ R  DG + E N+ FE   G P   VIGRT  +L LW   E    L+  
Sbjct: 442 VFQQCPDILLIARHSDGCLLEVNEAFEEQIGLPPDQVIGRTATDLDLW-GVEGSGPLLLE 500

Query: 227 TKAKGELVSMEVQFRASNGQVHDGILSAQKVELEGQPYLLSTFLDTSERKLAEQALKDSQ 286
              +G + ++E+ FR SNGQ+  G+ SA+  EL+G P L+    D S+ K  +Q L+ S+
Sbjct: 501 RLHQGGIRNLEMSFRRSNGQLFTGLTSAETFELDGTPALVVAVRDISQLKETQQQLQTSE 560

Query: 287 ERLDLALDSAQLGTWDWHIPSGMLYG-SARAAQLHGLDPIPFHEPFDAFFEGVPDDERDS 345
           E+   A  ++  G        G+L   +    +L G D  P  +   +   G+  D  + 
Sbjct: 561 EKFAKAFHASPDGLLLSRQSDGLLLEVNEGFCRLTGYDLNPTIDQ-TSLDLGIWVDLNER 619

Query: 346 MRDAYRSLREGPAGNYQLTYRVQLPDGSSRYLESRARLYRDESGVPLRMAGTLLDITDQV 405
            R   +  R+G   ++  T  ++  DG  R  E  AR       +P+     +L I   +
Sbjct: 620 KRLVDQLNRDGFVRDF--TCHIRRSDGQIRLCELSAR------PLPITGVDCMLTIARDI 671

Query: 406 EREQRLITSEEKFASLFQVSPDPICVTRQDTGQFIEINPAFTQIFGWTTTDVIDRS 461
                +    +  A++F+ + + + +T  D  +   +N AF++I G++  + + ++
Sbjct: 672 TERHLMQEKLQLAATVFENTAEGVLITDIDQ-RISAVNRAFSEITGYSEIEALGQT 726