Pairwise Alignments

Query, 1096 a.a., histidine kinase from Pseudomonas fluorescens FW300-N2E3

Subject, 994 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  452 bits (1162), Expect = e-131
 Identities = 295/828 (35%), Positives = 448/828 (54%), Gaps = 34/828 (4%)

Query: 282  LKDSQERLDLALDSAQLGTWDWHIPSGMLYGSARAAQLHGLDPIPFHEPFDAFFEGVPDD 341
            L++S+ RL+L   +A  G+W   + +  +  S   A + GL         +   +    +
Sbjct: 178  LRESESRLNLTEHTAGAGSWSLQLSTREVVHSDEFATILGLADHRQVRNLEDMVQRYSPE 237

Query: 342  ERDSMRDAYRSLREGPAGNYQLTYRVQLPDGSSRYLESRARLYRDESGVPLRMAGTLLDI 401
             R+ +R       +   G +    +V +  G+ +++ +     R  +G  +R+ G + DI
Sbjct: 238  WRNGIRQRLERCAQYGEG-FDEEIQVMVEGGAPKWVRTVGTAVRRANGQIVRIQGAIQDI 296

Query: 402  TDQVEREQRLITSEEKFAS-LFQVSPDPICVTRQDTGQFIEINPAFTQIFGWTTTDVIDR 460
            + Q + +Q  +    +  + L  ++   + + RQ    F  +N    ++   TT D++  
Sbjct: 297  SAQKQAQQDTLRLAMRLTTTLASITEAFVTLDRQCC--FTYLNQESERLLQKTTADLLG- 353

Query: 461  SADEIGLWDA-SVKRQQRIEQVIREQALNNVAIIVHHKDGQPLTCVISSRQISVGNEPC- 518
                + +W   S    QR++  + +    N  + +  +D  P       + + V   P  
Sbjct: 354  ----LEVWQGFSAGLSQRLKDQLTKSLNTNRRVEL--EDFFPTL----GKWLEVRAYPFA 403

Query: 519  --IVTTLRDITQQQRSEAALKASEEKFAKAFHSSPDAITITERDSG------RYLEVNDG 570
              +    RD+T+++RS+  L   E   ++      D + I E  +G      R + VND 
Sbjct: 404  EGLAVYFRDVTERRRSQEQLMLLETSVSRL----NDIVAIAETGAGSDDQEPRIVFVNDA 459

Query: 571  FCRLTGYSADEVVGKTVYQIGIWAEEKQRSTLLAALKAKGRVHHQEMLGRNKRGEILTVE 630
            F + TGYS  EV+G+T   +        +   LA    + R    E++ R K G +  VE
Sbjct: 460  FEQHTGYSRAEVLGQTPRMLLELDPAIPKLRELAQGLQQTRQARTELMVRRKNGAMFWVE 519

Query: 631  VSIEPI--TLNETACLLMTARDVSLLKNAEAQIRHLAYHDPLTNLPNRALLMDRLSQQIA 688
            + +  +  T  E    +   RD++  K AE  IRHLA++D LT+LPNR LL+DRL Q +A
Sbjct: 520  LEVVSVQATAEEVTHWVAVGRDITQRKTAEDMIRHLAFYDALTDLPNRQLLLDRLQQALA 579

Query: 689  LLKRHNLRGALLFLDLDHFKHINDSLGHPVGDTVLKIITARLEASVRMEDTVARLGGDEF 748
               R    GAL+F+DLD+FK +ND+LGH +GD +L+ + ARL  SVR  D VARLGGDEF
Sbjct: 580  ASARSGQHGALMFIDLDNFKILNDTLGHHMGDQLLQKVAARLTRSVRKTDMVARLGGDEF 639

Query: 749  VVLLSGLEGTRNEVSEQVRELADTLRELLSEPMFLDGQRLQVTPSIGVALIPDHGSTPTD 808
            VV++  L    +  + +   LA+ +   L EP  L G +   TPSIGV       S   +
Sbjct: 640  VVMVDDLSTDPDAAAFKATALAEKVLNTLREPFQLTGHQHFATPSIGVTSFNGQQSDVGE 699

Query: 809  LLKRADIALYRAKDSGRNATQMFHNTMQKAASERLRMETDLRLALSRGEFSVQYQPQVDA 868
            LLK+AD+A+Y+AK  GRN    F   M    S    + +DLR+ALS  +F V YQPQVD 
Sbjct: 700  LLKQADLAMYQAKSLGRNTLCFFDPNMAATVSANATVSSDLRVALSEQQFVVHYQPQVDR 759

Query: 869  LDGRIIGAEALVRWRHPRLGEQSPSEFIKVLEDSGLILEVGAWILDETCQAFRQLIDRGL 928
            + G I G EALVRW+HP+ G   P++FI V ED+GLIL +G W+L+++C+      DR  
Sbjct: 760  V-GVITGVEALVRWQHPQRGLIFPADFIPVAEDTGLILPLGQWVLEKSCEQLAAWADRP- 817

Query: 929  IDPLNFSLCVNISPRQFRQNDFVERIEQTLSSHGLPYSLLKLEVTEGIVIQNLDDTISKM 988
                N S+ VN+S RQFR  DFV+ +   ++  G+    LKLE+TE ++   ++ TI KM
Sbjct: 818  -QTANLSIAVNVSVRQFRHPDFVDMVMAAITRTGIRPHKLKLELTESLLADRMEITIDKM 876

Query: 989  RRLKKLGVSFAMDDFGTGYSSLTYLKRLPVDTLKIDQSFIRDATSDPNDAEIIRAIVAMA 1048
              LK LGV+ ++DDFG GYSSL+ LKRLP+D LKID+ F+ D  +DPNDA I RAI+A+A
Sbjct: 877  GMLKALGVTLSLDDFGVGYSSLSVLKRLPLDQLKIDKGFVADVLTDPNDAAISRAIIALA 936

Query: 1049 RSLELTVIAEGVETTEQLDFLQGLGCHLYQGYLHSQPLPLEGFLKLLK 1096
            +SL L V+AEGVET EQ DFL   GC  +QG+L ++PLP+E    LL+
Sbjct: 937  QSLSLQVVAEGVETQEQRDFLAYQGCDQFQGHLFAKPLPIEALDALLQ 984