Pairwise Alignments

Query, 325 a.a., transcriptional regulator from Pseudomonas fluorescens FW300-N2E3

Subject, 316 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  189 bits (479), Expect = 1e-52
 Identities = 120/317 (37%), Positives = 174/317 (54%), Gaps = 13/317 (4%)

Query: 8   VAILAYDGLCTFEFGIAVEIFGLARPEFDFPWYEH-RIVAV--DQGPMRAMGGIQVLADG 64
           VA+  +      +    +E+F +A      P  EH RI+ +  + GP+RA  G+ V  D 
Sbjct: 4   VAMALFPDFLLLDMAGPLEVFSIANRYL--PAAEHYRILTLGTEPGPLRASNGVAVQTD- 60

Query: 65  GMELLDTART----IIIPGWRSRTEPVPEALLSALRQAHARGARLLSICSGVFVLAATGL 120
              LLD A+     +++PG          ALL  L+ A  R  R  SIC+G FVL   GL
Sbjct: 61  --LLLDQAQDAYDLLLVPGGPGAYNECHPALLPWLKAAAPRARRFGSICTGAFVLGHAGL 118

Query: 121 LDGLSATTHWRYTEELSERFPNILVDPDVLYVDAGQLITSAGSAAGIDACLHLVARDFGT 180
           LD    TTHW YTE L + FP  +V+ D +Y+  G+LITS G  AGID  L +VA+D G 
Sbjct: 119 LDNHRVTTHWHYTERLIKAFPKAIVETDRIYLQDGRLITSGGVTAGIDLALSVVAQDHGK 178

Query: 181 QVANSVARRLVMSPQRTGGQAQFIPAPVSRTPR-SDLSRVMQWARERLHEPLGVRELASQ 239
           QVA  VA+ L++  +R GGQAQF P   +  P+ + ++RV     E L EP  +  +A+ 
Sbjct: 179 QVAVDVAKVLLVVMKRQGGQAQFSPMTAAVAPQETAITRVQNHVLEHLCEPFTIESMAAL 238

Query: 240 AAMSERTFLRRFSEATGASPKSWLQQQRLARARELLESSAHNTESIALQCGYRSVESFRV 299
           A MS R F R F++    +P ++LQ  R+ RAR+LLE++    +++A   G+ SV   R 
Sbjct: 239 AGMSARHFARLFAKEVQMTPMAFLQGARIDRARQLLETTDLPLKTVAFHAGFGSVRHMRF 298

Query: 300 AFRSVVGLPPSVYRERF 316
            F   +GL P+ YR++F
Sbjct: 299 LFSEKLGLNPTQYRQQF 315