Pairwise Alignments

Query, 325 a.a., transcriptional regulator from Pseudomonas fluorescens FW300-N2E3

Subject, 334 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  177 bits (450), Expect = 2e-49
 Identities = 106/317 (33%), Positives = 166/317 (52%), Gaps = 5/317 (1%)

Query: 5   PGLVAILAYDGLCTFEFGIAVEIFG----LARPEFDFPWYEHRIVAVDQGPMRAMGGIQV 60
           P +V +LA+D     +    +++F     LAR   +   Y   ++A    P+    G+ +
Sbjct: 2   PRIVHVLAFDNAQVLDVTGPLQVFASTNDLARQRGEPLPYAVSVIAAQSEPVMTSAGLAL 61

Query: 61  LADGGMELLDTARTIIIPG-WRSRTEPVPEALLSALRQAHARGARLLSICSGVFVLAATG 119
           +A+          T++I G W         AL+  +R+      R+ S+C+G F+LAA+G
Sbjct: 62  VAEPLPAADAPCDTLVIAGGWGVYGAAEDPALVDWVREKAKHTRRMTSVCTGAFLLAASG 121

Query: 120 LLDGLSATTHWRYTEELSERFPNILVDPDVLYVDAGQLITSAGSAAGIDACLHLVARDFG 179
           +LDG    THW   EEL+ +FP++ V+ + +++  G + TSAG  AGID CL LV  D G
Sbjct: 122 MLDGCRVATHWTRCEELARKFPSLTVESNPIFIQQGAVWTSAGVTAGIDLCLALVEEDLG 181

Query: 180 TQVANSVARRLVMSPQRTGGQAQFIPAPVSRTPRSDLSRVMQWARERLHEPLGVRELASQ 239
             +A  VAR LV+  +R GGQ+QF      +   S  + +  W  E L   L +  LA+Q
Sbjct: 182 RAIALEVARHLVVFLKRPGGQSQFSVTLSLQKDDSRFAELHAWMAENLTLDLNIPTLAAQ 241

Query: 240 AAMSERTFLRRFSEATGASPKSWLQQQRLARARELLESSAHNTESIALQCGYRSVESFRV 299
           A MSER+F+R +   TG +P   ++  R+  AR  L  S  + + IA+QCG+   E+ R 
Sbjct: 242 AGMSERSFVRHYRAETGQTPARAVELIRVETARRQLADSTASIKRIAVQCGFGCEETLRR 301

Query: 300 AFRSVVGLPPSVYRERF 316
           +F   + + P  YRERF
Sbjct: 302 SFLRALSVTPQAYRERF 318