Pairwise Alignments

Query, 557 a.a., RNA helicase from Pseudomonas fluorescens FW300-N2E3

Subject, 559 a.a., ATP-dependent DEAD-box RNA helicase DeaD from Pseudomonas putida KT2440

 Score =  972 bits (2513), Expect = 0.0
 Identities = 499/559 (89%), Positives = 537/559 (96%), Gaps = 2/559 (0%)

Query: 1   MTQETGGFAAFNLNPNILAAVIATGYEEPSAIQQQSIPIIMAGHDMIGQAQTGTGKTAAF 60
           MTQETGGFAA +LNPNI+AAV+ATGYEEPSAIQQQSIPII+AGHDMIGQAQTGTGKTAAF
Sbjct: 1   MTQETGGFAALDLNPNIVAAVVATGYEEPSAIQQQSIPIILAGHDMIGQAQTGTGKTAAF 60

Query: 61  ALPILHRIDPAKREPQALILAPTRELALQVATAFETYAKQMPGVTVVAVYGGAPMGPQLK 120
           ALPIL++ID +KREPQALILAPTRELALQVATAFETYAKQMPGV VVAVYGGAPMGPQL+
Sbjct: 61  ALPILNKIDVSKREPQALILAPTRELALQVATAFETYAKQMPGVNVVAVYGGAPMGPQLR 120

Query: 121 AIRNGAQIVVATPGRLCDHLRRDEKVLATVNHLVLDEADEMLKLGFMDDLEVIFKALPAT 180
           AIRNGAQIVVATPGRLCDHLRRDEKVL+TV +LVLDEADEMLKLGFMDDLEVIF A+PAT
Sbjct: 121 AIRNGAQIVVATPGRLCDHLRRDEKVLSTVQYLVLDEADEMLKLGFMDDLEVIFDAIPAT 180

Query: 181 RQTVLFSATLPQSIRAIAERHLRDPQHVKIQTKTQTVTAIEQAHLLVHADQKTSAVLSLL 240
           RQTVLFSATLP SIR+IAERHLR+P+HVKIQTKTQTVTAIEQAHL+VHADQK  AVL LL
Sbjct: 181 RQTVLFSATLPSSIRSIAERHLREPKHVKIQTKTQTVTAIEQAHLMVHADQKIPAVLRLL 240

Query: 241 EVEDFDALIMFVRTKQATLDLASALEAKGYKAAALNGDIAQNQRERVIESLKDGRLDIVV 300
           EVE+FDALI FVRTKQATLDLA+ALEAKGYKAAALNGDIAQNQRERVI+SLKDGRLDIVV
Sbjct: 241 EVEEFDALIAFVRTKQATLDLAAALEAKGYKAAALNGDIAQNQRERVIDSLKDGRLDIVV 300

Query: 301 ATDVAARGLDVPRITHVFNVDMPYDPESYVHRIGRTGRAGREGRALLLVTPRERRMLQVI 360
           ATDVAARGLDVPRITHVFNVDMPYDPESYVHRIGRTGRAGR+GRALLLVTPRERRMLQVI
Sbjct: 301 ATDVAARGLDVPRITHVFNVDMPYDPESYVHRIGRTGRAGRDGRALLLVTPRERRMLQVI 360

Query: 361 ERVTGQKVAEVRLPDAQAVLDARIKKLTNSLSPLVADAESTHGDLLDRLTADIGCTPRAL 420
           ERVTGQKVAE RLP+AQAVLDARIKKLT+SL+PLVA+AE+THG+L DRLT D+GC+ RAL
Sbjct: 361 ERVTGQKVAEARLPNAQAVLDARIKKLTSSLAPLVAEAEATHGELFDRLTTDLGCSARAL 420

Query: 421 AAALLRKATNAQALTLAAIEKERPLVPNNAPRGDRPER--TGDRPDRGDRERRAPIPLAE 478
           A+ALLRKATN QAL LAA+E+E+PLVP+ APRG+R ER   G+RPDRGDRERRAP+PLAE
Sbjct: 421 ASALLRKATNGQALDLAAVEREQPLVPSFAPRGERTERGERGERPDRGDRERRAPLPLAE 480

Query: 479 GRARCRTALGARDGIAAKNLLGAILNEGGLAREAIGRIQVRDSFSLVELPEDGLERLLTK 538
           GR RCRTALGARDGIAAKNLLGAILNEGGLAR+AIGRIQVRDSFSLVELPEDGLE+LL+K
Sbjct: 481 GRVRCRTALGARDGIAAKNLLGAILNEGGLARDAIGRIQVRDSFSLVELPEDGLEKLLSK 540

Query: 539 LKDTRVAGKQLKLRRYRED 557
           LKDTRVAGKQLKLRRYRED
Sbjct: 541 LKDTRVAGKQLKLRRYRED 559