Pairwise Alignments

Query, 153 a.a., flagellar motor switch protein from Pseudomonas fluorescens FW300-N2E3

Subject, 137 a.a., Flagellar motor switch protein FliN from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  113 bits (283), Expect = 1e-30
 Identities = 65/154 (42%), Positives = 97/154 (62%), Gaps = 21/154 (13%)

Query: 1   MADEMNTQDDQ--ALADEWAAALEETGDAGQDDIDALLAADAASSSSSSRLAMEEFGSVP 58
           M+D  N  D+   AL D WA AL E                A ++ S++    ++ G   
Sbjct: 1   MSDMNNPSDENTGALDDLWADALNEQ--------------KATTTKSAADAVFQQLGG-- 44

Query: 59  KNHEPVTLDGPNLDVILDIPVSISMEVGSTDINIRNLLQLNQGSVIELDRLAGEPLDVLV 118
                V+    ++D+I+DIPV +++E+G T + I+ LL+L QGSV+ LD LAGEPLD+L+
Sbjct: 45  ---GDVSGAMQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILI 101

Query: 119 NGTLIAHGEVVVVNEKFGIRLTDVISPSERIKKL 152
           NG LIA GEVVVV +K+G+R+TD+I+PSER+++L
Sbjct: 102 NGYLIAQGEVVVVADKYGVRITDIITPSERMRRL 135