Pairwise Alignments

Query, 432 a.a., mechanosensitive ion channel protein MscS from Pseudomonas fluorescens FW300-N2E3

Subject, 415 a.a., mechanosensitive channel protein, miniconductance from Escherichia coli BL21

 Score =  337 bits (864), Expect = 4e-97
 Identities = 164/382 (42%), Positives = 252/382 (65%), Gaps = 1/382 (0%)

Query: 31  VLLVIALLLGRVARYVVLHAVKLLGRQPAMQWFNDLFQNKVFHRLAQMTPSLVIQFGLNL 90
           ++ + A+++  +  +VVL   +      +  W   + QNK+FHRLA     +++      
Sbjct: 28  IIFLTAVVVHIILHWVVLRTFEKRAIASSRLWLQIITQNKLFHRLAFTLQGIIVNIQAVF 87

Query: 91  VPELSKTIQNFLGNVALSFTILFLVLALSALLNAMLDIYARTEHARTRSIKGYVQLAKMV 150
             +      + L   A  + +++ +L++ +LL+ +L++  +   A    +KG  Q  K++
Sbjct: 88  WLQKGTEAADILTTCAQLWIMMYALLSVFSLLDVILNLAQKFPTASQLPLKGIFQGIKLI 147

Query: 151 LFVFGAIIIVATLIDRSPLLLLSGLGAMSAVILLVYKDTLLSFVASVQLTSNDMLRVGDW 210
             +   I++++ LI +SP +L+SGLGAM+AV++LV+KD +L  VA +QL++NDML++GDW
Sbjct: 148 GAILVGILMISLLIGQSPAILISGLGAMAAVLMLVFKDPILGLVAGIQLSANDMLKLGDW 207

Query: 211 IEMPQVGADGDVVDITLHTVKVQNFDKTIVSIPTWRLMSESFKNWRGMQQSGGRRIKRSL 270
           +EMP+ GADG V+DI L TVKV+N+D TI +IPTW L+S+SFKNW GM  SGGRRIKRS+
Sbjct: 208 LEMPKYGADGAVIDIGLTTVKVRNWDNTITTIPTWSLVSDSFKNWSGMSASGGRRIKRSI 267

Query: 271 FIDASGVRFIHDDEEQKLTQVRLLTDYISRKQAELKSWNEAQGNVAAMSANRRRMTNIGT 330
            ID + +RF+ +DE Q+L +  LL  Y++ +  E+  WN  QG+  ++  N RRMTNIGT
Sbjct: 268 SIDVTSIRFLDEDEMQRLNKAHLLKPYLTSRHQEINEWNRQQGSTESV-LNLRRMTNIGT 326

Query: 331 FRAYALAYLKSHPEIQPNMTCMVRQMQTTAQGVPLEIYCFTRTTAWADYERIQGDIFDYL 390
           FRAY   YL++HP I+ +MT MVRQ+     G+PLEIY FT T  W +YE IQ DIFD++
Sbjct: 327 FRAYLNEYLRNHPRIRKDMTLMVRQLAPGDNGLPLEIYAFTNTVVWLEYESIQADIFDHI 386

Query: 391 LAVLPEFGLSLYQQPSGGDLRA 412
            A++ EFGL L+Q P+G D+R+
Sbjct: 387 FAIVEEFGLRLHQSPTGNDIRS 408