Pairwise Alignments

Query, 1072 a.a., chemotaxis protein CheY from Pseudomonas fluorescens FW300-N2E3

Subject, 948 a.a., Two-component sensor protein RcsC (EC 2.7.3.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  317 bits (811), Expect = 3e-90
 Identities = 217/658 (32%), Positives = 338/658 (51%), Gaps = 33/658 (5%)

Query: 314 PHPWTAVYVVGFKSFIDYAWWPLLGVLTLIIASIGGGWAFSRWYKTRVVLPAHQAHQSIS 373
           P   + VY V     ++     +L  + L +    G +  +R Y+ R+ +PA    Q + 
Sbjct: 294 PSSLSIVYSVPVDLVLERIRILILNAILLNVLVGAGLFTLARMYERRIFIPAESDAQRLE 353

Query: 374 ESEAFSRAVIDAAPTGLCVVRRSDHQVLLENQRIQEWQQSDRLIAALDQKYPLTSPGQTD 433
           E E F+R ++ +AP G+C++R  D   +L N+    +   + L     Q+      GQ  
Sbjct: 354 EHEQFNRKIVASAPVGICILRTIDGVNILSNELAHTYL--NMLTHEDRQRLTQIICGQQV 411

Query: 434 -----LEIEGHHLHVGVVDARYHGEDVWICAFHDVTRHIDDAAALEQALRAADSANEAKT 488
                L     +L +  V +RY  E+V IC   DV+  +    +L++  +AA+ A+++K+
Sbjct: 412 NFVDVLTSNNTNLQISFVHSRYRNENVAICVLVDVSTRVKMEESLQEMAQAAEQASQSKS 471

Query: 489 RFLATMSHEIRTPLYGVLGTLELLGLTDLGPRQQEYLRTIQRSSATLFQLISDVLDVSKI 548
            FLAT+SHE+RTPLYG++G L+LL   +L    +  +  +  SS+ L ++ISD+LD SKI
Sbjct: 472 MFLATVSHELRTPLYGIIGNLDLLQTKELPKGVERLVTAMNNSSSLLLKIISDILDFSKI 531

Query: 549 ESGQMTIEAQDFCPLELTEDTLCAYSAFAEAKGLQLYACIDSAIPDRVQGDPLRIRQILN 608
           ES Q+ IE ++F P E+       Y      K L LY  I+  +P  + GDP+R++Q+++
Sbjct: 532 ESEQLKIEPREFSPREVMNHITANYLPLVVRKQLGLYCFIEPDVPVSLNGDPMRLQQVIS 591

Query: 609 NLLSNAIKFTDNGRVVLRLRLLDLNAGGANLQWQVSDSGIGISQAQQSQLFDPFYQVRDA 668
           NLLSNAIKFTD G +VL +R       G  L  +V D+G+GI   +  +LFDPF+QV   
Sbjct: 592 NLLSNAIKFTDIGCIVLHVR-----CDGDYLSIRVRDTGVGIPAKEVVRLFDPFFQVGTG 646

Query: 669 SSE--AGAGLGLAICWWLCELMAGQLKVVSEPGLGSSFSLQLHLACAVGQLSDCPEFAPD 726
                 G GLGLAIC  L  +M G + V SEPG+GS F+L++ L  A   +    E    
Sbjct: 647 VQRNFQGTGLGLAICEKLISMMDGDISVDSEPGMGSQFTLRIPLYGAQYPVKKSVE-GLA 705

Query: 727 APPIYVQAPAPELAQHVCNWFNRLGQET-RILGPDAKNLPGSSALLLDVLPSSQTAWGG- 784
               ++      L Q +     R G  T R  G +    P +  +L+ V  + +  W G 
Sbjct: 706 GTCCWLAVRNTSLCQFIETSLARSGVHTQRYEGQE----PAADDILI-VDDALEHTWQGR 760

Query: 785 ------PRVIATTAGANPAEYTAEGWSVDAHDIRAM---AWAVSFAQQGVGQRNHTALTE 835
                  R I       P E+     SV  H++ A+    +++    + +     T    
Sbjct: 761 AAVVFCRRHIGIPLERAPGEWVHSVASV--HELPALLARIYSIELDSEALSSALPTTDKT 818

Query: 836 QARRLDLNILIAEDNPINRAIIKEQLEALGCTVVATADGEQALHQWLPGLFDMVLTDVNM 895
                D+ IL+ +D+PINR ++ +QL +LG       DG  AL+       D+VL+DVNM
Sbjct: 819 ADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNAIDIVLSDVNM 878

Query: 896 PVMNGYELTKALRRNDADLPIIGVTANALRDEGERCAAVGMNAWLVKPLNLHTLRTQL 953
           P M+GY LT+ +R+    LP++GVTANAL +E +RC   GM++ L KP+ L  L+  L
Sbjct: 879 PNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTLDVLKQTL 936