Pairwise Alignments

Query, 1072 a.a., chemotaxis protein CheY from Pseudomonas fluorescens FW300-N2E3

Subject, 949 a.a., hybrid sensory kinase in two-component regulatory system with RcsB and YojN (RefSeq) from Escherichia coli BW25113

 Score =  312 bits (799), Expect = 9e-89
 Identities = 216/656 (32%), Positives = 339/656 (51%), Gaps = 29/656 (4%)

Query: 314 PHPWTAVYVVGFKSFIDYAWWPLLGVLTLIIASIGGGWAFSRWYKTRVVLPAHQAHQSIS 373
           P   + VY V     ++     +L  + L + +    +  +R Y+ R+ +PA      + 
Sbjct: 294 PSSLSIVYSVPVDKVLERIRMLILNAILLNVLAGAALFTLARMYERRIFIPAESDALRLE 353

Query: 374 ESEAFSRAVIDAAPTGLCVVRRSDHQVLLENQRIQEWQQSDRLIAALDQKYPLTSPGQTD 433
           E E F+R ++ +AP G+C++R +D   +L N+    +   + L     Q+      GQ  
Sbjct: 354 EHEQFNRKIVASAPVGICILRTADGVNILSNELAHTYL--NMLTHEDRQRLTQIICGQQV 411

Query: 434 -----LEIEGHHLHVGVVDARYHGEDVWICAFHDVTRHIDDAAALEQALRAADSANEAKT 488
                L     +L +  V +RY  E+V IC   DV+  +    +L++  +AA+ A+++K+
Sbjct: 412 NFVDVLTSNNTNLQISFVHSRYRNENVAICVLVDVSSRVKMEESLQEMAQAAEQASQSKS 471

Query: 489 RFLATMSHEIRTPLYGVLGTLELLGLTDLGPRQQEYLRTIQRSSATLFQLISDVLDVSKI 548
            FLAT+SHE+RTPLYG++G L+LL   +L       +  +  SS+ L ++ISD+LD SKI
Sbjct: 472 MFLATVSHELRTPLYGIIGNLDLLQTKELPKGVDRLVTAMNNSSSLLLKIISDILDFSKI 531

Query: 549 ESGQMTIEAQDFCPLELTEDTLCAYSAFAEAKGLQLYACIDSAIPDRVQGDPLRIRQILN 608
           ES Q+ IE ++F P E+       Y      K L LY  I+  +P  + GDP+R++Q+++
Sbjct: 532 ESEQLKIEPREFSPREVMNHITANYLPLVVRKQLGLYCFIEPDVPVALNGDPMRLQQVIS 591

Query: 609 NLLSNAIKFTDNGRVVLRLRLLDLNAGGANLQWQVSDSGIGISQAQQSQLFDPFYQVRDA 668
           NLLSNAIKFTD G +VL +R     A G  L  +V D+G+GI   +  +LFDPF+QV   
Sbjct: 592 NLLSNAIKFTDTGCIVLHVR-----ADGDYLSIRVRDTGVGIPAKEVVRLFDPFFQVGTG 646

Query: 669 SSE--AGAGLGLAICWWLCELMAGQLKVVSEPGLGSSFSLQLHLACAVGQLSDCPEFAPD 726
                 G GLGLAIC  L  +M G + V SEPG+GS F++++ L  A        E    
Sbjct: 647 VQRNFQGTGLGLAICEKLISMMDGDISVDSEPGMGSQFTVRIPLYGAQYPQKKGVE-GLS 705

Query: 727 APPIYVQAPAPELAQHVCNWFNRLGQETRILGPDAKNLPGSSALLLDVLPSSQTAWGGPR 786
               ++      L Q +     R G    +   + +       L+ D + S +  W G R
Sbjct: 706 GKRCWLAVRNASLCQFLETSLQRSG--IVVTTYEGQEPTPEDVLITDEVVSKK--WQG-R 760

Query: 787 VIATTAGAN---PAEYTAEGW--SVDA-HDIRAMAWAVSFAQ-QGVGQRNHTALTEQA-- 837
            + T    +   P E     W  SV A H++ A+   +   + +     N    T++A  
Sbjct: 761 AVVTFCRRHIGIPLEKAPGEWVHSVAAPHELPALLARIYLIEMESDDPANALPSTDKAVS 820

Query: 838 RRLDLNILIAEDNPINRAIIKEQLEALGCTVVATADGEQALHQWLPGLFDMVLTDVNMPV 897
              D+ IL+ +D+PINR ++ +QL +LG       DG  AL+       D+VL+DVNMP 
Sbjct: 821 DNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNHIDIVLSDVNMPN 880

Query: 898 MNGYELTKALRRNDADLPIIGVTANALRDEGERCAAVGMNAWLVKPLNLHTLRTQL 953
           M+GY LT+ +R+    LP+IGVTANAL +E +RC   GM++ L KP+ L  ++  L
Sbjct: 881 MDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTLDVIKQTL 936