Pairwise Alignments

Query, 869 a.a., fimbrial protein from Pseudomonas fluorescens FW300-N2E3

Subject, 866 a.a., putative outer membrane fimbrial subunit export usher protein from Escherichia coli BL21

 Score =  421 bits (1082), Expect = e-121
 Identities = 259/792 (32%), Positives = 419/792 (52%), Gaps = 49/792 (6%)

Query: 66  PGIYRVNVTVDNRMIEQRDVRFVRETAQQKPTLTGLFPCLSIDQLTALGVDP-ARLAHAD 124
           PG YRV++ ++  +++ R+V FV  T ++     G+  CL+ + L A+GV+  A  A   
Sbjct: 65  PGGYRVDIVLNQTIVDTRNVNFVEITPEK-----GIAACLTTESLDAMGVNTDAFPAFKQ 119

Query: 125 ISTEQCVYFNRDLAGVTYTYDFHKQRLDLQIPQAFV-----GSVPFATRRKRWSDGEQVA 179
           +  + CV     +   + T++ +K RL++ +PQ  +     G VP     +RW +G    
Sbjct: 120 LDKQACVPLAEIIPDASVTFNVNKLRLEISVPQIAIKSNARGYVP----PERWDEGINAL 175

Query: 180 FANYSFSGSQY---QTDYNNRQSQFGSVRSGINTGAWRLRNFSNWQKSTNVEGQWKSLDT 236
              YSFSG+       D ++  S F ++ SG+N G WRLRN S W +S+    +WK+L +
Sbjct: 176 LLGYSFSGANSIHSSADSDSGDSYFLNLNSGVNLGPWRLRNNSTWSRSSGQTAEWKNLSS 235

Query: 237 YVQRDMGNMMAIATIGESSTDSDLFDSISYRGIGIESDLDMLPEESRNFAPVVRGVANGR 296
           Y+QR +  +    T+G+  T  D FDS+S+RG+ + SD +MLP+  + FAPVVRG+A   
Sbjct: 236 YLQRAVIPLKGELTVGDDYTAGDFFDSVSFRGVQLASDDNMLPDSLKGFAPVVRGIAKSN 295

Query: 297 SLVTLRQRGYVISEQWVPSGPFALKDLYSTPSNGDIEVTVQGPNGERQVYTQSFSSVPYM 356
           + +T++Q GY I + +V  G F + DLYST S+GD+ V ++  +G    Y+  FSSVP +
Sbjct: 296 AQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFSSVPLL 355

Query: 357 MREGQQSYSLTAGQYRPADGARDQAKPAFVLGTLRRGLSDGTTLFGGALVSDQYKSSLLG 416
            R+G+  Y++T  +YR    + +Q +  F   TL+ G   GTT +GG   ++ Y++++ G
Sbjct: 356 QRQGRIKYAVTLAKYR--TNSNEQQESKFAQATLQWGGPWGTTWYGGGQYAEYYRAAMFG 413

Query: 417 FAHDYAGFGAISLDVTHAVSDDLGPERKTLAGQSYRFRYSKTLSLTDTNFSLIGYRYSTS 476
              ++  FGAIS D T A S     ++    GQSYRF Y+KTL+   TNF L+GYRYSTS
Sbjct: 414 LGFNFGDFGAISFDATQAKS--TLADQSEHKGQSYRFLYAKTLNHLGTNFQLMGYRYSTS 471

Query: 477 GYYSFSEANNARANRSLAPYVDESLSNGEHFSPY--LQGHMKSSFTANVSQQFGNYGGLY 534
           G+Y+ S+      +     + D    +   +S Y  L    +     N+SQQ G YG  Y
Sbjct: 472 GFYTLSDTMYKHMDG--YEFNDGDDEDTPMWSRYYNLFYTKRGKLQVNISQQLGEYGSFY 529

Query: 535 ANLTKTAYWNMAKSNTSIQLGYS-----FSVGRASYNLGLAQNGGSDDDIRSLSLSVSLP 589
            + ++  YW+  + +  +Q GY+      S+G  S+N   ++     D + +L+ S+ L 
Sbjct: 530 LSGSQQTYWHTDQQDRLLQFGYNTQIKDLSLG-ISWNYSKSRGQPDADQVFALNFSLPLN 588

Query: 590 LGDPGSSSRIGLSNNQ---------DSNGNATRAATFSGSSFKDDALSYSLGVNQQLSDE 640
           L  P S+       N          D+ G+ T+    + +   D  LSYS  V Q  + E
Sbjct: 589 LLLPRSNDSYTRKKNYAWMTSNTSIDNEGHTTQNLGLTETLLDDGNLSYS--VQQGYNSE 646

Query: 641 DRILGGSVAARYNAANAIWHGSYNQDRN--TRQMDYGVEGGVVAMRDTLMFTQPLGETNI 698
            +   GS +  Y  A A     YN   N   +Q++Y + G +VA    +   Q LGETN+
Sbjct: 647 GKTANGSASMDYKGAFADARVGYNYSDNGSQQQLNYALSGSLVAHSQGITLGQSLGETNV 706

Query: 699 IVATPGAADVGVLTRSGVRTNNSGYTIISSAQPYRDNRVSLDTDSLSDNVDIAGLVQEVT 758
           ++A PGA +  V   +G++T+  GYT++  A  YR+NR++LD  SL  NVD+   V  V 
Sbjct: 707 LIAAPGAENTRVANSTGLKTDWRGYTVVPYATSYRENRIALDAASLKRNVDLENAVVNVV 766

Query: 759 PKRGAFVMARFKTQNGRRLLVTVETAQGMAAPFAANVQLFDSTGAVLSEAMVADKGRVFI 818
           P +GA V+A F    G R+L+   + QG+   F A   L    G   +  ++ D G +++
Sbjct: 767 PTKGALVLAEFNAHAGARVLMKT-SKQGIPLRFGAIATL---DGVQANSGIIDDDGSLYM 822

Query: 819 TGVPEQSRLVIK 830
            G+P +  + ++
Sbjct: 823 AGLPAKGTISVR 834