Pairwise Alignments

Query, 377 a.a., ribonuclease D from Pseudomonas fluorescens FW300-N2E3

Subject, 371 a.a., Ribonuclease D (EC 3.1.26.3) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  224 bits (570), Expect = 4e-63
 Identities = 137/367 (37%), Positives = 199/367 (54%), Gaps = 14/367 (3%)

Query: 8   IRDNDSLGQFCAQWQQLPFVALDTEFMRVDTFYPIAGLLQIGDGERAFLIDPLTIDNWQP 67
           I  +D+L   C   +  P +ALDTEF+R  T+YP  GL+Q+ DG    LIDPL I +W P
Sbjct: 2   IETDDALASLCEAVRACPAIALDTEFVRTRTYYPQLGLIQLFDGANVALIDPLGISDWSP 61

Query: 68  LAQLLENPAVVKVLHACSEDLEVLLRLTGSLPAPLFDTQLAAAYLNLGFSMGYSRLVSEV 127
           L  +L +  + K LHA SEDLEV L   G LP PL DTQ+ AA+     S G++ +V E 
Sbjct: 62  LKAVLRDTGITKFLHAGSEDLEVFLNAFGELPEPLIDTQILAAFCGRPLSWGFASMVEEY 121

Query: 128 LGIDLPKGETRSDWLQRPLSETQISYAAEDAVHLAEVFVHLRPKLSDEKYAWVLEDGAEL 187
            G+ L K E+R+DWL RPLSE Q  YAA D  +L  +   L  +     +     D   L
Sbjct: 122 TGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPIAKKLMIETEAAGWLPAALDECRL 181

Query: 188 VANLRREVD-PYEVYREAKLAWKLSRAQLAVLRELCAWREHEARARDLPRNRIVREHSLW 246
           +   R+E+  P E +R+   AW+L   QLA L+ L  WR  +AR RD+  N +VRE +LW
Sbjct: 182 MQQRRQEIQAPEEAWRDITNAWQLRTRQLACLQLLADWRLRKARERDMAVNFVVREENLW 241

Query: 247 PLARTQPDNLGALAKIEDMHPRTVRQDGEFLLGLIKQAGSVPPDQWPPAVPEPL------ 300
            +AR  P +LG L  +  +    +R  G+ L+ L+ +A ++P +    A+PEPL      
Sbjct: 242 AVARYMPGSLGELDSL-GLSGSEIRFHGKTLISLVAKAQALPEE----ALPEPLLNLMDM 296

Query: 301 PVEAAALVKRLRALGQAEAERLNIAPELMLRKKTLEALLKSGFPEGPYQ-LPDSLRGWRR 359
           P    A  K ++AL    +   +++ EL+  ++ +  LL   +   P    P+ + GWR 
Sbjct: 297 PGYRKAF-KAIKALVAEVSASHHVSGELLASRRQINQLLNWHWKLKPQNGQPELISGWRA 355

Query: 360 ELMGQAL 366
           ELM + L
Sbjct: 356 ELMEEKL 362