Pairwise Alignments

Query, 350 a.a., recombinase RecA from Pseudomonas fluorescens FW300-N2E3

Subject, 353 a.a., RecA protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  491 bits (1264), Expect = e-143
 Identities = 249/350 (71%), Positives = 293/350 (83%), Gaps = 6/350 (1%)

Query: 1   MDDNKKKALAAALGQIERQFGKGAVMRMGDQDRQAIPAISTGSLGLDIALGIGGLPKGRI 60
           +D+NK+KALAAALGQIE+QFGKG++MR+G+     +  ISTGSL LDIALG GGLP GRI
Sbjct: 3   IDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRI 62

Query: 61  VEIYGPESSGKTTLTLSVIAQAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDT 120
           VEIYGPESSGKTTLTL VIA AQ+ G TCAF+DAEHALDP YA KLGV++D+LL SQPDT
Sbjct: 63  VEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDT 122

Query: 121 GEQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGN 180
           GEQALEI D L RS AVDVI+VDSVAAL PKAEIEGE+GD H+GL AR+MSQA+RK+ GN
Sbjct: 123 GEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182

Query: 181 IKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE 240
           +K +N L+IFINQIRMKIGVMFG+PETTTGGNALKFYASVRLDIRR GAVKEGD VVGSE
Sbjct: 183 LKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGDNVVGSE 242

Query: 241 TRVKVVKNKVASPFRQAEFQILYGKGIYLNGEMIDLGVLHGFVEKSGAWYAYNGSKIGQG 300
           TRVKVVKNK+A+PF+QAEFQILYG+GI   GE++DLGV    +EK+GAWY+YNG KIGQG
Sbjct: 243 TRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYNGEKIGQG 302

Query: 301 KANSAKFLQDNPDIAATLEKQIRDKLLT---PTPDV---KASPVKETADD 344
           KAN+  +L++NP  A  +EK++R+ LL+    TPD     +  V ET +D
Sbjct: 303 KANATTWLKENPATAKEIEKRVRELLLSNQNATPDFAVDDSEGVAETNED 352